Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.6■□□□□ 0.57
CNOT1A5YKK6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNOT1A5YKK6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.6■□□□□ 0.57
CNOT1A5YKK6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.6■□□□□ 0.57
CNOT1A5YKK6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 KRT18P1-202ENST00000452408 1331 ntBASIC18.59■□□□□ 0.57
CNOT1A5YKK6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 DRAXINP1-201ENST00000437611 948 ntBASIC18.59■□□□□ 0.57
CNOT1A5YKK6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 AC092865.5-201ENST00000545435 363 ntBASIC18.59■□□□□ 0.57
CNOT1A5YKK6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CNOT1A5YKK6 AL355385.1-201ENST00000606123 409 ntBASIC18.59■□□□□ 0.57
CNOT1A5YKK6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT1A5YKK6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT1A5YKK6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.58■□□□□ 0.57
CNOT1A5YKK6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT1A5YKK6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.58■□□□□ 0.57
CNOT1A5YKK6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT1A5YKK6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT1A5YKK6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT1A5YKK6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT1A5YKK6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CNOT1A5YKK6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT1A5YKK6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
CNOT1A5YKK6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.58■□□□□ 0.56
CNOT1A5YKK6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
CNOT1A5YKK6 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.58■□□□□ 0.56
CNOT1A5YKK6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT1A5YKK6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT1A5YKK6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT1A5YKK6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.58■□□□□ 0.56
CNOT1A5YKK6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNOT1A5YKK6 AL024507.2-201ENST00000606070 2574 ntBASIC18.58■□□□□ 0.56
CNOT1A5YKK6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 SLC25A1P1-201ENST00000528351 927 ntBASIC18.57■□□□□ 0.56
CNOT1A5YKK6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 AC091304.2-201ENST00000564639 760 ntBASIC18.57■□□□□ 0.56
CNOT1A5YKK6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNOT1A5YKK6 AL162741.1-201ENST00000565563 1558 ntBASIC18.57■□□□□ 0.56
CNOT1A5YKK6 KRT8P8-201ENST00000434750 1448 ntBASIC18.56■□□□□ 0.56
CNOT1A5YKK6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.56■□□□□ 0.56
CNOT1A5YKK6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms