Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV8-6A0A0B4J262 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 UBE2DNL-204ENST00000602536 740 ntBASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 MYCNOS-205ENST00000641950 531 ntBASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 FER1L4-210ENST00000615531 5998 ntBASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 AC005332.7-201ENST00000614046 2005 ntBASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV8-6A0A0B4J262 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 AC125437.2-201ENST00000625180 2167 ntBASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV8-6A0A0B4J262 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV8-6A0A0B4J262 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV8-6A0A0B4J262 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV8-6A0A0B4J262 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV8-6A0A0B4J262 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRAV8-6A0A0B4J262 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms