Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 AC068338.2-201ENST00000563278 1430 ntBASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-4A0A0B4J246 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 AC016405.3-201ENST00000607710 860 ntBASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 OR10C1-204ENST00000622521 1039 ntBASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-4A0A0B4J246 DPP3P2-201ENST00000416030 1696 ntBASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 CNN2P6-201ENST00000439038 900 ntBASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 AC112907.3-201ENST00000577781 2400 ntBASIC13.59□□□□□ -0.23
TRAV8-4A0A0B4J246 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms