Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AC012618.2-201ENST00000428058 849 ntBASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 MIR4497-201ENST00000583208 89 ntBASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 RPS2P55-201ENST00000397318 883 ntBASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 KRT16P5-201ENST00000455284 522 ntBASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AC107956.1-201ENST00000494359 873 ntBASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AC233702.5-201ENST00000584107 538 ntBASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFSF12-TNFSF13A0A0A6YY99 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms