Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 RPS2P52-201ENST00000469610 820 ntBASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 RAP2CP1-201ENST00000605103 478 ntBASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 AC104581.1-202ENST00000635932 2618 ntBASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.21■□□□□ 0.51
TRBV5-3A0A0A0MS03 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRBV5-3A0A0A0MS03 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 Z98044.1-201ENST00000632503 1764 ntBASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 KRT8P8-201ENST00000434750 1448 ntBASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRBV5-3A0A0A0MS03 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 YBX1P10-201ENST00000444752 975 ntBASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 MIR5787-201ENST00000611784 55 ntBASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 AC006557.6-201ENST00000623071 864 ntBASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 AL512353.2-201ENST00000448759 1962 ntBASIC18.19■□□□□ 0.5
TRBV5-3A0A0A0MS03 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRBV5-3A0A0A0MS03 MIPEPP3-201ENST00000412105 444 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms