Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL031985.3-201ENST00000565390 2449 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 RNVU1-6-201ENST00000364688 164 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 RNU1-44P-201ENST00000384453 163 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AC104297.1-201ENST00000393779 870 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 RPL5P19-201ENST00000404228 893 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 ZNF603P-201ENST00000405613 487 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AL590139.1-201ENST00000416267 400 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AC019050.1-201ENST00000418508 492 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AC073335.1-201ENST00000427776 363 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 NDUFA5P1-201ENST00000433858 341 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 RPS20P1-201ENST00000434853 354 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 EIF4A1P11-201ENST00000451239 222 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 RN7SL354P-201ENST00000469282 294 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 ELOCP28-201ENST00000590044 317 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AC090181.2-201ENST00000602975 672 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AP002360.3-201ENST00000607673 710 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AP005019.3-201ENST00000620418 560 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AL049536.1-201ENST00000625043 744 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 MIR6715B-201ENST00000637172 77 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AC007390.2-201ENST00000606229 3803 ntBASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
HLA-DRB4X5D2U9 AC018555.1-201ENST00000567548 1980 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AL592148.3-201ENST00000608771 2646 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AC079741.1-201ENST00000321498 212 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 RNA5SP151-201ENST00000365632 117 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 RPS3AP23-201ENST00000401762 784 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 RPS16P5-201ENST00000406501 404 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AC234779.1-201ENST00000425910 285 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AL158073.1-201ENST00000426848 1104 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 RPL23AP43-201ENST00000446445 471 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 DDX39BP2-208ENST00000453923 258 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AL133477.1-201ENST00000457472 514 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 RN7SL205P-201ENST00000490174 284 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AP000827.1-201ENST00000527814 258 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 DEFB109D-201ENST00000529497 240 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AL360157.1-201ENST00000565962 87 ntBASIC3.32□□□□□ -1.88
HLA-DRB4X5D2U9 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms