Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 THAP12P9-201ENST00000503971 2360 ntBASIC5.5□□□□□ -1.53
PCDHGA6Q9Y5G7 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PCDHGA6Q9Y5G7 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
PCDHGA6Q9Y5G7 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDHGA6Q9Y5G7 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 PHKBP1-201ENST00000450951 1951 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC021755.1-201ENST00000559747 1447 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 ELL2P3-201ENST00000457883 1602 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 RN7SKP162-201ENST00000363605 345 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 RN7SKP124-201ENST00000364730 341 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AL022400.1-201ENST00000423946 935 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 MRPS21P2-201ENST00000424704 264 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 RPL37P1-201ENST00000432310 284 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 HMGB3P24-201ENST00000433260 622 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC005297.1-201ENST00000444765 862 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC097262.1-201ENST00000452559 548 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 NDUFA5P7-201ENST00000452914 242 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 RN7SL809P-201ENST00000482040 297 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 DUTP7-201ENST00000507982 486 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 RNU6-1261P-201ENST00000517194 104 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC027309.2-201ENST00000520566 192 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AL049872.1-201ENST00000556323 322 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC016180.1-201ENST00000567945 403 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 MIR1273E-201ENST00000581165 102 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC010200.2-201ENST00000605098 235 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AL451064.1-201ENST00000607718 471 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC079395.2-201ENST00000610982 737 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC005962.2-201ENST00000611427 652 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC009163.6-201ENST00000612367 342 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC073530.2-201ENST00000623987 261 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AL390862.1-201ENST00000635467 1469 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC009962.1-201ENST00000567327 3813 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 AC011933.2-201ENST00000578539 2790 ntBASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDHGA6Q9Y5G7 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA6Q9Y5G7 AC093671.1-201ENST00000624981 2929 ntBASIC5.48□□□□□ -1.53
PCDHGA6Q9Y5G7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA6Q9Y5G7 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA6Q9Y5G7 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
PCDHGA6Q9Y5G7 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA6Q9Y5G7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA6Q9Y5G7 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PCDHGA6Q9Y5G7 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA6Q9Y5G7 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDHGA6Q9Y5G7 AC090017.1-201ENST00000548612 1779 ntBASIC5.48□□□□□ -1.53
PCDHGA6Q9Y5G7 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.48□□□□□ -1.53
PCDHGA6Q9Y5G7 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PCDHGA6Q9Y5G7 MIR133A2-201ENST00000347538 102 ntBASIC5.48□□□□□ -1.53
PCDHGA6Q9Y5G7 RNU6-553P-201ENST00000364047 96 ntBASIC5.48□□□□□ -1.53
PCDHGA6Q9Y5G7 U3.23-201ENST00000391132 200 ntBASIC5.48□□□□□ -1.53
PCDHGA6Q9Y5G7 NPM1P4-201ENST00000414095 812 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms