Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 RNU2-6P-201ENST00000411404 190 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AC127391.1-201ENST00000411737 98 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AL353193.1-201ENST00000421444 268 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 RPL7P57-201ENST00000423238 740 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AL445669.1-201ENST00000426743 755 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AC022022.1-201ENST00000430304 178 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 CBX1P4-201ENST00000439415 457 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 MORF4-201ENST00000447135 971 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 ARPC3P5-201ENST00000448802 534 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 RPSAP24-201ENST00000461543 873 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 RPL23AP64-201ENST00000469465 435 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 RPL10P7-201ENST00000495649 625 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AC109481.1-201ENST00000509173 282 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 RNU6-1003P-201ENST00000517099 105 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AC022690.1-201ENST00000526681 550 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 BRD9P1-201ENST00000529855 560 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AC007068.2-201ENST00000543168 395 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 RN7SL131P-201ENST00000579043 256 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 RN7SL426P-201ENST00000579106 295 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 VN1R80P-201ENST00000597126 338 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 RNU6-87P-201ENST00000607561 108 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 RMST_3.1-201ENST00000611651 109 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AL133173.2-201ENST00000614270 90 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 uc_338.9-201ENST00000617424 182 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 CCT4P2-201ENST00000233836 1548 ntBASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC6.24□□□□□ -1.41
BHLHE41Q9C0J9 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 OR52B1P-201ENST00000316506 909 ntBASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 RNA5SP321-201ENST00000362722 111 ntBASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 RNA5SP152-201ENST00000365184 110 ntBASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 MRPL42P2-201ENST00000403169 426 ntBASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 AL356432.1-201ENST00000405809 419 ntBASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 OR9R1P-201ENST00000412200 877 ntBASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 EIF1P3-201ENST00000423841 334 ntBASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 MTCO2P12-201ENST00000427426 682 ntBASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 AL592114.2-201ENST00000440142 532 ntBASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 TVP23CP1-201ENST00000450317 639 ntBASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.23□□□□□ -1.41
BHLHE41Q9C0J9 RNU7-136P-201ENST00000458819 69 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms