Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MCRIP2P2-201ENST00000605276 209 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 AC015849.1-201ENST00000605548 662 ntTSL 3 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 AC012443.1-201ENST00000605605 231 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 AP003121.1-201ENST00000609845 414 ntTSL 3 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SL539P-201ENST00000610974 291 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SL196P-201ENST00000614361 291 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 AL162274.2-201ENST00000614406 332 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 CKLF-CMTM1-205ENST00000615332 395 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SL286P-201ENST00000616519 291 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 Metazoa_SRP.114-201ENST00000618435 279 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 AC069503.3-201ENST00000618674 145 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 AC126915.3-201ENST00000620111 208 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 AC048347.1-201ENST00000624621 427 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 WASH5P-209ENST00000633742 173 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 U6.103-201ENST00000637085 61 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 MIR1297-201ENST00000637311 77 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 GOSR2-240ENST00000640621 3059 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 SLC26A9-203ENST00000367135 4799 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 NLRP1-204ENST00000354411 4332 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 CXorf57-202ENST00000372548 3861 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 HK1-206ENST00000448642 3868 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 SYTL4-202ENST00000276141 3737 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 AC093904.4-201ENST00000565044 3273 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ZSCAN23-201ENST00000289788 3126 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 RPP14-201ENST00000295959 3121 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 TTLL3-202ENST00000383827 4834 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 FCRLA-210ENST00000367959 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 METTL15-204ENST00000407364 4242 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 SEC14L3-201ENST00000215812 2086 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 DOCK8-202ENST00000382331 1922 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 MTMR3-205ENST00000406629 3758 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 CELF2-201ENST00000354897 1754 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 GAPVD1-219ENST00000495955 5309 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 SELENOT-202ENST00000471696 3469 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 FAM60A-201ENST00000337682 3163 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 HYDIN-209ENST00000538248 3152 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 AC020978.6-201ENST00000571197 3177 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 PCBP2-203ENST00000437231 3026 ntAPPRIS ALT1 TSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 BTN3A2-209ENST00000527422 1460 ntAPPRIS P3 TSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 RIC3-201ENST00000309737 2859 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 LILRB1-204ENST00000396327 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 C20orf197-201ENST00000625080 2732 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 GNAT1-201ENST00000232461 2417 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 AC005722.2-201ENST00000577087 3370 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 VWA3B-213ENST00000477737 4454 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ATP1A2-201ENST00000361216 5421 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ADD1-210ENST00000503455 3206 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 AL138916.2-201ENST00000606686 2144 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 GIT2-205ENST00000457474 5291 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 BIVM-ERCC5-201ENST00000602836 5143 ntAPPRIS P5 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 NDUFB5-214ENST00000493866 4046 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ABT1-201ENST00000274849 2949 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF700-203ENST00000622593 2901 ntAPPRIS ALT2 TSL 4 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 BROX-208ENST00000539697 3734 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 AC068860.1-201ENST00000623701 3736 ntBASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF285-201ENST00000544719 2793 ntAPPRIS P3 TSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 LSG1-201ENST00000265245 3572 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 AGBL2-203ENST00000525123 3577 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 SNHG3-202ENST00000437681 2614 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-4Q9BYR3 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AC026951.1-201ENST00000559530 2459 ntBASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ATP8A2-201ENST00000255283 3287 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SCMH1-201ENST00000326197 3275 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 POU6F2-201ENST00000403058 2335 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 AKAP13-217ENST00000560302 3765 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 SYT11-201ENST00000368324 5240 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 MTO1-201ENST00000370300 2961 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 ERCC5-202ENST00000375954 2986 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 NDRG1-229ENST00000537882 2975 ntTSL 2 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
KRTAP4-4Q9BYR3 NFYC-201ENST00000308733 2158 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms