Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC28BQ9BUN5 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC007390.2-201ENST00000606229 3803 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 MIR323A-201ENST00000362199 86 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 SNORD51.1-201ENST00000365405 77 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 RN7SKP269-201ENST00000365545 319 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 MIR421-201ENST00000365696 85 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 MIR3074-201ENST00000384885 81 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 MIR223-201ENST00000385204 110 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 NCSTNP1-201ENST00000406229 144 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 RN7SKP267-201ENST00000410381 285 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 CYCSP11-201ENST00000436426 315 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 BUD31P2-201ENST00000449374 300 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 APOOP2-201ENST00000461561 539 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 COPS8P2-201ENST00000473228 627 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC025768.1-201ENST00000510057 267 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 HMGB1P47-201ENST00000511281 589 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 SCARNA21.2-201ENST00000516600 166 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 RNU6-889P-201ENST00000517189 103 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC004825.1-201ENST00000555068 586 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC125257.1-201ENST00000560400 2930 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC092868.3-201ENST00000560515 784 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 RN7SL652P-201ENST00000577769 300 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC090181.2-201ENST00000602975 672 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC012213.4-201ENST00000606457 354 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AL592494.3-201ENST00000609485 464 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC004948.1-201ENST00000609858 672 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC015922.4-201ENST00000612568 690 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AL512506.1-201ENST00000613918 449 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 EIF3FP1-201ENST00000613970 806 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC006249.1-201ENST00000621223 471 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 NXPH1-205ENST00000602349 1953 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 PABPC1P6-201ENST00000445594 1829 ntBASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC28BQ9BUN5 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 VPS35P1-201ENST00000563400 1518 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 SAMMSON-226ENST00000642089 1582 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 RNU1-15P-201ENST00000353977 144 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 RN7SKP95-201ENST00000362860 303 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 GLULP6-201ENST00000399502 913 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 Z98745.1-201ENST00000402553 494 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC023141.6-201ENST00000429418 337 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AL606490.7-201ENST00000433136 191 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 CNOT7P2-201ENST00000441051 832 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 CCRL1P1-201ENST00000449542 1053 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC010733.1-201ENST00000451515 401 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AP002345.1-201ENST00000456493 928 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 MTND2P30-201ENST00000456663 382 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 EIF2S2P4-201ENST00000461070 984 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC104629.2-201ENST00000468627 598 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 AC090543.1-201ENST00000492168 485 ntBASIC4.41□□□□□ -1.7
CCDC28BQ9BUN5 RPL36AP41-201ENST00000493820 306 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms