Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC083923.1-201ENST00000523708 376 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AP001636.2-201ENST00000525517 696 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AC068993.1-201ENST00000546724 589 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 MTND4P33-201ENST00000556706 766 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AC127024.5-201ENST00000580085 462 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AC008751.2-201ENST00000597885 980 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AC097065.2-201ENST00000608159 533 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 U6.107-201ENST00000637108 79 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 BX649567.1-201ENST00000642071 1134 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 PABPC1P6-201ENST00000445594 1829 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 PCAT14-202ENST00000627127 3935 ntBASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CDK5RAP3Q96JB5 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 AC007996.1-201ENST00000620414 2821 ntBASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 RNU4-51P-201ENST00000364206 140 ntBASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 NPM1P40-201ENST00000412758 733 ntBASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 RPS24P7-201ENST00000416921 246 ntBASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 NANOGP4-201ENST00000427230 913 ntBASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 CDC42P1-201ENST00000456658 548 ntBASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 AC005410.1-202ENST00000460347 485 ntBASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 HIGD1AP14-201ENST00000507617 282 ntBASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 MTATP6P15-201ENST00000527233 835 ntBASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 DEFB130C-202ENST00000530001 230 ntBASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 SUMO2P15-201ENST00000604285 278 ntBASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 AC231759.1-201ENST00000616455 597 ntBASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 MTND4P8-201ENST00000514997 1362 ntBASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 CASC19-221ENST00000641309 1382 ntBASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.77□□□□□ -1.49
CDK5RAP3Q96JB5 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC093311.1-201ENST00000506586 2021 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 SNORA62.2-201ENST00000364672 152 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 RNU6-549P-201ENST00000384433 107 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC093719.1-202ENST00000392735 373 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 HIGD1AP12-201ENST00000427832 281 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC084290.1-201ENST00000434995 374 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 RPL5P25-201ENST00000441148 775 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC005002.1-201ENST00000447458 540 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 RPL7L1P1-201ENST00000448259 785 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 AC245028.2-201ENST00000458673 253 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 RPS18P6-201ENST00000476880 458 ntBASIC5.76□□□□□ -1.49
CDK5RAP3Q96JB5 RPL23AP37-201ENST00000479658 549 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms