Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 HMGB1P5-201ENST00000255320 642 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 RNU1-19P-201ENST00000363306 165 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 RNU1-146P-201ENST00000364015 165 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 RNU4-4P-201ENST00000364588 130 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 RNU6-304P-201ENST00000364855 107 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 RNU6-225P-201ENST00000384613 103 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 RNU1-77P-201ENST00000390868 162 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 EI24P3-201ENST00000399046 1062 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 RSL24D1P4-201ENST00000400938 484 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 TMSB4XP8-201ENST00000402089 135 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 TMSB4XP6-201ENST00000415187 135 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AC114814.2-201ENST00000419195 485 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AC098592.1-201ENST00000419352 333 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AL133325.1-201ENST00000421090 382 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 MRPS36P1-201ENST00000421291 307 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 TMSB4XP1-201ENST00000424567 135 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 DPRXP1-201ENST00000426312 460 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 NPM1P22-201ENST00000427761 952 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AL136231.1-201ENST00000429407 730 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 MTCO1P54-201ENST00000430139 712 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 THAP5P1-201ENST00000439089 262 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 EEF1B2P5-201ENST00000444820 548 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 MTND2P4-201ENST00000445034 1004 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 MTCO2P25-201ENST00000447065 681 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 TPTE2P5-203ENST00000458118 728 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 COPS8P2-201ENST00000473228 627 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 SYPL1P1-201ENST00000473622 768 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 GAPDHP36-201ENST00000480688 918 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AC073358.1-201ENST00000505671 684 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AC117532.1-201ENST00000514638 323 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 MTND4LP31-201ENST00000514859 294 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AC019322.1-201ENST00000571869 389 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 BPTFP1-201ENST00000579209 492 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AL162431.4-201ENST00000604674 411 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AL359757.1-201ENST00000623176 255 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AC091931.1-201ENST00000623488 728 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AC074101.1-201ENST00000637861 241 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 OR55B1P-203ENST00000641518 2602 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 HSPA8P14-201ENST00000552265 1805 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 AL603750.1-201ENST00000624216 1717 ntBASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CTHRC1Q96CG8 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CTHRC1Q96CG8 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
CTHRC1Q96CG8 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CTHRC1Q96CG8 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.61
CTHRC1Q96CG8 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 AL445523.1-201ENST00000451184 1362 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 OR9G4-201ENST00000302957 984 ntBASIC4.96□□□□□ -1.62
CTHRC1Q96CG8 FAM3C2-201ENST00000312214 681 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms