Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL078595.2-201ENST00000605309 1780 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 ERCC6-202ENST00000374127 1782 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 AL356968.2-201ENST00000412769 1257 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 Z74021.1-201ENST00000423610 407 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 RPL7P33-201ENST00000444159 742 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 DUX4L52-201ENST00000549363 777 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 AC010608.2-201ENST00000624830 470 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 AL731532.1-201ENST00000623972 4236 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 SNORA5A-201ENST00000384111 134 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 SNORA74C-2-201ENST00000411179 201 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 AC096664.2-201ENST00000411843 406 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 KRR1P1-201ENST00000419430 803 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 AL390334.1-201ENST00000556395 450 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 AC105074.1-201ENST00000623380 3095 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 MAPK10-253ENST00000641010 4072 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 AC007529.1-201ENST00000418574 2178 ntBASIC2.88□□□□□ -1.95
ALMS1Q8TCU4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 HMGN1P15-201ENST00000513870 295 ntBASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 SCARNA15-201ENST00000607520 4325 ntBASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 DDX18P5-201ENST00000534547 1306 ntBASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 AC116667.1-201ENST00000604855 2072 ntBASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 IFITM8P-201ENST00000522529 394 ntBASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 AL122125.1-201ENST00000616999 600 ntBASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 CASC19-261ENST00000641853 1638 ntBASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 MIR200C-201ENST00000384980 68 ntBASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 AMMECR1LP1-201ENST00000415152 841 ntBASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 AC245052.5-201ENST00000416320 649 ntBASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 AC074250.1-201ENST00000511117 192 ntBASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 AC005972.3-201ENST00000606304 481 ntBASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 AC011816.2-201ENST00000607089 556 ntBASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 AC099654.11-201ENST00000638857 294 ntBASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 AP001002.1-201ENST00000625148 1513 ntBASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
ALMS1Q8TCU4 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 RNU4-44P-201ENST00000363050 141 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 OR8G7P-201ENST00000616658 848 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 AL354798.1-201ENST00000622505 329 ntBASIC2.86□□□□□ -1.95
ALMS1Q8TCU4 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms