Protein–RNA interactions for Protein: Q16787

LAMA3, Laminin subunit alpha-3, humanhuman

Predictions only

Length 3,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3Q16787 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.3□□□□□ -1.72
LAMA3Q16787 AL160290.3-201ENST00000604869 165 ntBASIC4.3□□□□□ -1.72
LAMA3Q16787 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LAMA3Q16787 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LAMA3Q16787 AL731532.2-201ENST00000623542 1953 ntBASIC4.3□□□□□ -1.72
LAMA3Q16787 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LAMA3Q16787 AL355488.2-201ENST00000609909 2850 ntBASIC4.3□□□□□ -1.72
LAMA3Q16787 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
LAMA3Q16787 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.3□□□□□ -1.72
LAMA3Q16787 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.3□□□□□ -1.72
LAMA3Q16787 AC005726.1-201ENST00000494679 427 ntBASIC4.3□□□□□ -1.72
LAMA3Q16787 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.3□□□□□ -1.72
LAMA3Q16787 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.3□□□□□ -1.72
LAMA3Q16787 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LAMA3Q16787 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LAMA3Q16787 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
LAMA3Q16787 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.3□□□□□ -1.72
LAMA3Q16787 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.3□□□□□ -1.72
LAMA3Q16787 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LAMA3Q16787 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.3□□□□□ -1.72
LAMA3Q16787 AL133162.1-201ENST00000463228 453 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 RPL12P22-201ENST00000519073 490 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 AC034105.3-201ENST00000565294 442 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC4.29□□□□□ -1.72
LAMA3Q16787 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
LAMA3Q16787 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LAMA3Q16787 AL360270.2-201ENST00000562952 5985 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LAMA3Q16787 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LAMA3Q16787 AL034370.1-201ENST00000397254 1590 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
LAMA3Q16787 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.29□□□□□ -1.72
LAMA3Q16787 UBE2V1P2-201ENST00000397758 440 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 TCEA1P2-201ENST00000420496 906 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 AL358472.1-201ENST00000431295 329 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.29□□□□□ -1.72
LAMA3Q16787 AL359922.3-201ENST00000624779 1670 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 AC239868.2-201ENST00000564237 4527 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
LAMA3Q16787 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.29□□□□□ -1.72
LAMA3Q16787 AC004944.1-201ENST00000517807 3059 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LAMA3Q16787 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.29□□□□□ -1.72
LAMA3Q16787 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LAMA3Q16787 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LAMA3Q16787 AP000542.2-201ENST00000623199 6179 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
LAMA3Q16787 RNA5SP267-201ENST00000364893 126 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 RPS29P19-201ENST00000479709 171 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.29□□□□□ -1.72
LAMA3Q16787 OR8I1P-201ENST00000529291 931 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 CYCSP40-201ENST00000575927 294 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 AC006077.1-201ENST00000604746 343 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 AC007546.2-201ENST00000623996 360 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 MTCO1P24-201ENST00000515438 1558 ntBASIC4.29□□□□□ -1.72
LAMA3Q16787 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
LAMA3Q16787 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LAMA3Q16787 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.29□□□□□ -1.72
LAMA3Q16787 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LAMA3Q16787 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC4.29□□□□□ -1.72
LAMA3Q16787 AC092641.1-201ENST00000440229 772 ntBASIC4.28□□□□□ -1.72
LAMA3Q16787 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.28□□□□□ -1.72
LAMA3Q16787 AP002360.3-201ENST00000607673 710 ntBASIC4.28□□□□□ -1.72
LAMA3Q16787 AL033543.1-201ENST00000623440 13454 ntBASIC4.28□□□□□ -1.72
LAMA3Q16787 AP000473.2-201ENST00000602659 1537 ntBASIC4.28□□□□□ -1.72
LAMA3Q16787 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LAMA3Q16787 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LAMA3Q16787 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LAMA3Q16787 VPS35P1-201ENST00000563400 1518 ntBASIC4.28□□□□□ -1.72
LAMA3Q16787 SNORA3.3-201ENST00000408712 125 ntBASIC4.28□□□□□ -1.72
LAMA3Q16787 RPL7P22-201ENST00000466005 733 ntBASIC4.28□□□□□ -1.72
LAMA3Q16787 RN7SL504P-201ENST00000494496 287 ntBASIC4.28□□□□□ -1.72
LAMA3Q16787 AC108145.1-201ENST00000503770 153 ntBASIC4.28□□□□□ -1.72
LAMA3Q16787 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.28□□□□□ -1.72
LAMA3Q16787 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.28□□□□□ -1.72
LAMA3Q16787 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.28□□□□□ -1.72
LAMA3Q16787 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LAMA3Q16787 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
LAMA3Q16787 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LAMA3Q16787 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
LAMA3Q16787 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LAMA3Q16787 RPL21P23-201ENST00000446654 460 ntBASIC4.28□□□□□ -1.72
LAMA3Q16787 AGGF1P3-201ENST00000493675 1213 ntBASIC4.28□□□□□ -1.72
LAMA3Q16787 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.28□□□□□ -1.72
LAMA3Q16787 FCF1-203ENST00000553615 954 ntTSL 3 BASIC4.28□□□□□ -1.72
LAMA3Q16787 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.28□□□□□ -1.72
LAMA3Q16787 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.27□□□□□ -1.73
LAMA3Q16787 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
LAMA3Q16787 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LAMA3Q16787 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LAMA3Q16787 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LAMA3Q16787 BDP1P-201ENST00000582658 1990 ntBASIC4.27□□□□□ -1.73
LAMA3Q16787 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.27□□□□□ -1.73
LAMA3Q16787 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LAMA3Q16787 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.27□□□□□ -1.73
LAMA3Q16787 PCNPP4-201ENST00000414817 517 ntBASIC4.27□□□□□ -1.73
LAMA3Q16787 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.27□□□□□ -1.73
LAMA3Q16787 RNA5SP497-201ENST00000516081 97 ntBASIC4.27□□□□□ -1.73
LAMA3Q16787 AC015914.2-201ENST00000618167 288 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms