Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 RN7SKP74-201ENST00000362849 309 ntBASIC4.24□□□□□ -1.73
CHD7Q9P2D1 Y_RNA.510-201ENST00000384511 114 ntBASIC4.24□□□□□ -1.73
CHD7Q9P2D1 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 RPL37P3-201ENST00000456825 293 ntBASIC4.24□□□□□ -1.73
CHD7Q9P2D1 RPL7P1-201ENST00000468161 747 ntBASIC4.24□□□□□ -1.73
CHD7Q9P2D1 MTND6P6-201ENST00000478031 263 ntBASIC4.24□□□□□ -1.73
CHD7Q9P2D1 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 AC083899.2-201ENST00000423285 1376 ntBASIC4.24□□□□□ -1.73
CHD7Q9P2D1 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.24□□□□□ -1.73
CHD7Q9P2D1 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 HMGB3P19-201ENST00000403971 560 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 AC106707.2-201ENST00000484182 374 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 OR56B2P-201ENST00000317102 954 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 SNORA60-201ENST00000362396 134 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 AL158156.1-201ENST00000422509 473 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 RPS4XP10-201ENST00000465034 731 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 AP000563.1-201ENST00000490865 758 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 RNA5SP179-201ENST00000517284 121 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 AC022655.2-201ENST00000577280 318 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 AC074029.4-201ENST00000624796 1859 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 MTCO1P12-201ENST00000414273 1543 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 AP001284.1-201ENST00000528393 2118 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 OR6K3-202ENST00000368146 996 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 AL591363.1-201ENST00000450091 483 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 AL136126.1-201ENST00000473603 402 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 AC098799.1-201ENST00000504752 800 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.23□□□□□ -1.73
CHD7Q9P2D1 OR6C71P-202ENST00000641886 1107 ntBASIC4.23□□□□□ -1.73
CHD7Q9P2D1 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 AC068733.2-201ENST00000605434 1418 ntBASIC4.22□□□□□ -1.73
CHD7Q9P2D1 OR51H2P-202ENST00000641424 3046 ntBASIC4.22□□□□□ -1.73
CHD7Q9P2D1 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 AC104619.4-201ENST00000510773 249 ntBASIC4.22□□□□□ -1.73
CHD7Q9P2D1 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 AC007458.1-201ENST00000542812 373 ntBASIC4.22□□□□□ -1.73
CHD7Q9P2D1 FRG1EP-201ENST00000634469 770 ntBASIC4.22□□□□□ -1.73
CHD7Q9P2D1 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 CCAT2-201ENST00000630920 1752 ntBASIC4.22□□□□□ -1.73
CHD7Q9P2D1 AL080315.1-201ENST00000406055 466 ntBASIC4.22□□□□□ -1.73
CHD7Q9P2D1 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 RPL5P24-201ENST00000463742 885 ntBASIC4.22□□□□□ -1.73
CHD7Q9P2D1 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.22□□□□□ -1.73
CHD7Q9P2D1 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms