Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC017100.2-201ENST00000584628 355 ntBASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 AL590032.1-201ENST00000604920 252 ntBASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 AC016925.2-201ENST00000605108 242 ntBASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 ACTR3BP1-201ENST00000605584 1247 ntBASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 AL158196.1-201ENST00000616786 434 ntBASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 AL132822.1-201ENST00000617063 513 ntBASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 FAM27E2-201ENST00000619668 403 ntBASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 7SK.10-201ENST00000621414 298 ntBASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 AL034408.1-201ENST00000637712 664 ntBASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 PHF2P2-202ENST00000444553 2865 ntBASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PRPF38BQ5VTL8 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 CASC19-246ENST00000641625 1606 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 RNU6-984P-201ENST00000363236 109 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 RNU6-316P-201ENST00000391027 107 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 TPMTP2-201ENST00000414372 726 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 UQCRBP1-201ENST00000421129 336 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 AL645937.1-202ENST00000421799 937 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 GPR143P-201ENST00000434155 205 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 RPS26P40-201ENST00000435209 294 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 RPL23AP15-201ENST00000450202 459 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 AC009963.2-201ENST00000453431 138 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 RPL31P50-201ENST00000471002 296 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 RPL23AP8-201ENST00000479812 475 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 AC027575.1-201ENST00000481064 460 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 RPL7P39-201ENST00000481157 744 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 RPL38P4-201ENST00000502376 214 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 TMEM248P1-201ENST00000510579 951 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 BTF3P13-201ENST00000513224 490 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 COX6CP8-201ENST00000522620 226 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 HSPE1P3-201ENST00000559254 309 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 AC006006.1-201ENST00000603082 144 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 EIF3L-203ENST00000412331 3220 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 SOX6-211ENST00000528429 2656 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 USP9YP4-201ENST00000424401 1745 ntBASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
PRPF38BQ5VTL8 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
PRPF38BQ5VTL8 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms