Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC005332.5-201ENST00000591222 2919 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AP000776.1-201ENST00000530032 1663 ntBASIC5.28□□□□□ -1.56
RNF220Q5VTB9 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AL031595.2-201ENST00000624215 19071 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 RNU6-492P-201ENST00000363035 104 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 RPL31P52-201ENST00000407532 367 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 RNU2-42P-201ENST00000410697 113 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AK4P4-201ENST00000419465 646 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC233981.1-201ENST00000423224 461 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 SKP1P3-201ENST00000429280 487 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AL389925.1-201ENST00000432257 728 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC010307.1-201ENST00000467206 836 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 NDUFA5P9-201ENST00000472609 340 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 RPL5P22-201ENST00000480199 884 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 DUTP1-201ENST00000493631 470 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC010486.2-201ENST00000505572 483 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 RNU6-202P-201ENST00000515998 96 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 RNA5SP464-201ENST00000516251 108 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC139365.2-201ENST00000517972 253 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC027369.5-201ENST00000533838 755 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC007834.2-201ENST00000536310 343 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC079905.1-201ENST00000549280 475 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC004825.1-201ENST00000555068 586 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC096996.1-201ENST00000563813 325 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC093519.1-201ENST00000566109 298 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC022069.1-201ENST00000582910 658 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AL354760.1-201ENST00000608357 643 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AL450489.1-201ENST00000612071 468 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 MIR6889-201ENST00000613185 59 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC243756.2-201ENST00000618406 463 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AC022106.2-201ENST00000620114 757 ntBASIC5.27□□□□□ -1.57
RNF220Q5VTB9 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF220Q5VTB9 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC083843.2-201ENST00000568248 6253 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC005539.1-201ENST00000443768 1479 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 DDX18P5-201ENST00000534547 1306 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 RNA5SP273-201ENST00000362484 113 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 RNU1-150P-201ENST00000362491 162 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 RNU1-65P-201ENST00000363919 148 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 RNU6-115P-201ENST00000364310 107 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 RNU4-2-201ENST00000365668 141 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 SUGT1P1-201ENST00000379514 476 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AL356131.1-201ENST00000405826 414 ntBASIC5.26□□□□□ -1.57
RNF220Q5VTB9 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.26□□□□□ -1.57
RNF220Q5VTB9 AC096921.1-201ENST00000411661 375 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms