Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CLCA3P-203ENST00000490028 2781 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 TOPORSLP1-201ENST00000467693 2102 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 RNU6-1103P-201ENST00000384150 107 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 RNU6-784P-201ENST00000384330 106 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 OR3A2-201ENST00000408891 1076 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 AC024082.2-201ENST00000434771 238 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 FABP3P2-201ENST00000453169 399 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 SBDSP1-204ENST00000453858 737 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 DHFRP3-201ENST00000455595 559 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 RNU7-157P-201ENST00000459600 66 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 AC093278.1-201ENST00000494700 600 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 PTP4A1P4-201ENST00000512479 322 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 CYP4F27P-201ENST00000514557 494 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 KCTD9P6-201ENST00000522306 950 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 OR4A45P-201ENST00000529954 901 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 RPL12P25-202ENST00000598100 674 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 AC004853.1-201ENST00000604902 698 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 AC113139.1-201ENST00000605049 239 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 RPL12P48-201ENST00000605620 304 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 AC015922.4-201ENST00000612568 690 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 AC096861.1-201ENST00000616652 240 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 AC006511.3-201ENST00000624929 1783 ntBASIC7.84□□□□□ -1.15
RC3H1Q5TC82 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
RC3H1Q5TC82 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.16
RC3H1Q5TC82 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.16
RC3H1Q5TC82 MAPK10-287ENST00000641217 3037 ntBASIC7.84□□□□□ -1.16
RC3H1Q5TC82 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.84□□□□□ -1.16
RC3H1Q5TC82 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.84□□□□□ -1.16
RC3H1Q5TC82 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 MTND4P1-201ENST00000457501 1466 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AC061975.7-201ENST00000592016 2692 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 MIR375-201ENST00000362103 64 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 RN7SKP160-201ENST00000363804 340 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 RNA5SP132-201ENST00000364725 118 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 SNORA33.2-201ENST00000365413 134 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 RNU6-1105P-201ENST00000384774 107 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AL096829.1-201ENST00000413677 457 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AL353193.1-201ENST00000421444 268 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 VDAC1P6-201ENST00000430062 855 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 HMGB1P45-201ENST00000435986 653 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AC097499.1-201ENST00000444277 208 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AL163193.1-201ENST00000444895 788 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 SUMO1P2-201ENST00000452524 304 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 RN7SL269P-201ENST00000467795 305 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AC010493.1-201ENST00000513479 292 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 CYCSP22-201ENST00000517555 339 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AP003122.4-201ENST00000530980 758 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AC027026.1-201ENST00000532323 742 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 MRPS21P9-201ENST00000571150 257 ntBASIC7.83□□□□□ -1.16
RC3H1Q5TC82 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
RC3H1Q5TC82 MIR193BHG-214ENST00000641765 509 ntBASIC7.83□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms