Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RSPO4Q2I0M5 NCOA4P2-201ENST00000340589 1813 ntBASIC6.32□□□□□ -1.4
RSPO4Q2I0M5 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 TMSB4XP2-201ENST00000335179 210 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC005294.1-201ENST00000355509 281 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 SNORA70.3-201ENST00000365075 132 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 RNU2-64P-201ENST00000411315 191 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC004690.1-201ENST00000418216 328 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 PIGFP2-201ENST00000421400 651 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 MTCYBP10-201ENST00000424905 650 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC009965.2-201ENST00000425328 970 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 MTCO1P54-201ENST00000430139 712 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC009961.2-201ENST00000435771 251 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 CACYBPP1-201ENST00000438592 684 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AL445665.1-202ENST00000452436 324 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 C1DP4-201ENST00000455429 424 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 MRPS17P3-201ENST00000465453 385 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC105417.1-201ENST00000514691 285 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 RNU6-988P-201ENST00000519081 107 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC107953.1-201ENST00000522216 297 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 OR6M2P-201ENST00000529831 871 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC022878.1-201ENST00000530684 149 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AP000889.2-201ENST00000532684 490 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AL137100.2-201ENST00000555786 315 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 RN7SL208P-201ENST00000577964 296 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AL713866.2-201ENST00000603579 219 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC112191.3-201ENST00000604371 277 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC068722.2-201ENST00000618734 544 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC110994.2-201ENST00000635481 492 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 CYP1D1P-201ENST00000416662 1433 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC089998.1-201ENST00000548575 3141 ntBASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC6.31□□□□□ -1.4
RSPO4Q2I0M5 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 AL359396.1-201ENST00000623151 2376 ntBASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 GAPDHP24-201ENST00000328713 983 ntBASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 Y_RNA.28-201ENST00000362554 111 ntBASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 RNA5SP110-201ENST00000362638 115 ntBASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 RNU6-74P-201ENST00000384235 107 ntBASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 RNU6-308P-201ENST00000390957 107 ntBASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 RPL24P7-201ENST00000399435 453 ntBASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 AL592114.1-201ENST00000403842 483 ntBASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 RN7SKP296-201ENST00000411185 341 ntBASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 BX890604.2-201ENST00000427883 474 ntBASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 AC239367.3-201ENST00000428996 814 ntBASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 CFL1P4-201ENST00000451536 498 ntBASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.3□□□□□ -1.4
RSPO4Q2I0M5 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms