Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ECM1Q16610 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ECM1Q16610 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
ECM1Q16610 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ECM1Q16610 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ECM1Q16610 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ECM1Q16610 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ECM1Q16610 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.81□□□□□ -1.32
ECM1Q16610 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.81□□□□□ -1.32
ECM1Q16610 WDR95P-201ENST00000425638 1542 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ECM1Q16610 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
ECM1Q16610 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
ECM1Q16610 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
ECM1Q16610 GAPDHP24-201ENST00000328713 983 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.81□□□□□ -1.32
ECM1Q16610 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
ECM1Q16610 RNU105B-201ENST00000364478 208 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
ECM1Q16610 Y_RNA.453-201ENST00000384223 109 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 Y_RNA.554-201ENST00000384672 102 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
ECM1Q16610 U8.14-201ENST00000390843 143 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 RNA5SP156-201ENST00000410250 110 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 NPM1P4-201ENST00000414095 812 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 HMGA1P8-201ENST00000414130 321 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 AC048351.1-201ENST00000420064 602 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.81□□□□□ -1.32
ECM1Q16610 AC130360.1-201ENST00000425489 1117 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.81□□□□□ -1.32
ECM1Q16610 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.81□□□□□ -1.32
ECM1Q16610 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ECM1Q16610 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.81□□□□□ -1.32
ECM1Q16610 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ECM1Q16610 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.81□□□□□ -1.32
ECM1Q16610 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.81□□□□□ -1.32
ECM1Q16610 ELOCP10-201ENST00000440624 327 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 RPS10P18-201ENST00000442662 495 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 AC097463.1-201ENST00000447288 481 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 MTCO1P48-201ENST00000448024 1096 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 RPL39P6-201ENST00000448289 150 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 MEMO1P3-201ENST00000459811 302 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC6.81□□□□□ -1.32
ECM1Q16610 AC109481.1-201ENST00000509173 282 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 AC091133.4-201ENST00000511142 308 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC6.81□□□□□ -1.32
ECM1Q16610 MTCO2P4-201ENST00000517968 247 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC6.81□□□□□ -1.32
ECM1Q16610 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.81□□□□□ -1.32
ECM1Q16610 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.81□□□□□ -1.32
ECM1Q16610 AC130365.2-201ENST00000525882 1201 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 AP002748.2-201ENST00000528671 348 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.81□□□□□ -1.32
ECM1Q16610 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC6.81□□□□□ -1.32
ECM1Q16610 AC006512.2-201ENST00000543250 486 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.81□□□□□ -1.32
ECM1Q16610 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.81□□□□□ -1.32
ECM1Q16610 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.81□□□□□ -1.32
ECM1Q16610 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC6.81□□□□□ -1.32
ECM1Q16610 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ECM1Q16610 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.81□□□□□ -1.32
ECM1Q16610 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.81□□□□□ -1.32
ECM1Q16610 AC233280.2-201ENST00000603917 1070 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 ELOCP34-201ENST00000604436 327 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC6.81□□□□□ -1.32
ECM1Q16610 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC6.81□□□□□ -1.32
ECM1Q16610 AP000894.4-201ENST00000610185 483 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 AC096861.1-201ENST00000616652 240 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.81□□□□□ -1.32
ECM1Q16610 AC068733.2-201ENST00000605434 1418 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
ECM1Q16610 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ECM1Q16610 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ECM1Q16610 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
ECM1Q16610 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
ECM1Q16610 AL034546.1-201ENST00000623740 3693 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.81□□□□□ -1.32
ECM1Q16610 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
ECM1Q16610 AC022507.1-201ENST00000548349 1505 ntBASIC6.81□□□□□ -1.32
ECM1Q16610 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.8□□□□□ -1.32
ECM1Q16610 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.8□□□□□ -1.32
ECM1Q16610 AC104966.1-201ENST00000467010 1464 ntBASIC6.8□□□□□ -1.32
ECM1Q16610 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.8□□□□□ -1.32
ECM1Q16610 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
ECM1Q16610 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.8□□□□□ -1.32
ECM1Q16610 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
ECM1Q16610 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.8□□□□□ -1.32
ECM1Q16610 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ECM1Q16610 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.8□□□□□ -1.32
ECM1Q16610 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ECM1Q16610 SNRPEP3-201ENST00000338402 276 ntBASIC6.8□□□□□ -1.32
ECM1Q16610 Y_RNA.813-201ENST00000364639 102 ntBASIC6.8□□□□□ -1.32
ECM1Q16610 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ECM1Q16610 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
ECM1Q16610 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
ECM1Q16610 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.8□□□□□ -1.32
ECM1Q16610 AL590002.1-201ENST00000406554 418 ntBASIC6.8□□□□□ -1.32
ECM1Q16610 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
ECM1Q16610 RNU6-248P-201ENST00000410720 107 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms