Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC104763.1-201ENST00000475274 360 ntBASIC5.12□□□□□ -1.59
HOXC8P31273 AL161747.1-201ENST00000480068 358 ntBASIC5.12□□□□□ -1.59
HOXC8P31273 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXC8P31273 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC8P31273 RFPL4AP5-201ENST00000514977 504 ntBASIC5.12□□□□□ -1.59
HOXC8P31273 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC5.12□□□□□ -1.59
HOXC8P31273 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC8P31273 AC040174.2-201ENST00000602701 465 ntBASIC5.12□□□□□ -1.59
HOXC8P31273 OR4H6P-202ENST00000603819 340 ntBASIC5.12□□□□□ -1.59
HOXC8P31273 AC090948.1-201ENST00000607464 549 ntBASIC5.12□□□□□ -1.59
HOXC8P31273 AC138965.3-201ENST00000623875 498 ntBASIC5.12□□□□□ -1.59
HOXC8P31273 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC8P31273 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC8P31273 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HOXC8P31273 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC8P31273 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC8P31273 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC8P31273 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC8P31273 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC8P31273 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC8P31273 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC8P31273 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC8P31273 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HOXC8P31273 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC8P31273 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXC8P31273 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC8P31273 OR4K17-201ENST00000315543 1032 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HOXC8P31273 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC8P31273 RNU6-244P-201ENST00000391028 104 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 AP000580.1-201ENST00000404439 358 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC8P31273 TRGV6-201ENST00000417928 299 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 AL121878.1-201ENST00000418638 859 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 MTND4P24-201ENST00000424002 397 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 DPY19L1P2-201ENST00000426647 915 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC8P31273 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC8P31273 BTF3P6-201ENST00000448054 499 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC8P31273 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 RN7SL809P-201ENST00000482040 297 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC8P31273 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC8P31273 AC093840.1-201ENST00000511599 336 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 AC015795.1-201ENST00000513669 327 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.11□□□□□ -1.59
HOXC8P31273 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC8P31273 CKS1BP1-201ENST00000555221 240 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 SETP1-201ENST00000556014 845 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 LINC00557-201ENST00000563184 1279 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.11□□□□□ -1.59
HOXC8P31273 AC022884.3-201ENST00000579571 248 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 AC010503.3-201ENST00000594355 540 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC8P31273 AL355802.4-201ENST00000607635 548 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 AP005019.3-201ENST00000620418 560 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC8P31273 AL034370.1-201ENST00000397254 1590 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HOXC8P31273 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC8P31273 PCAT14-202ENST00000627127 3935 ntBASIC5.11□□□□□ -1.59
HOXC8P31273 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC8P31273 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HOXC8P31273 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HOXC8P31273 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC8P31273 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC8P31273 AC008549.2-201ENST00000333482 706 ntBASIC5.1□□□□□ -1.59
HOXC8P31273 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC8P31273 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC8P31273 Z98745.1-201ENST00000402553 494 ntBASIC5.1□□□□□ -1.59
HOXC8P31273 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC8P31273 TMBIM7P-201ENST00000418074 855 ntBASIC5.1□□□□□ -1.59
HOXC8P31273 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC8P31273 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC8P31273 AL160175.1-201ENST00000428124 247 ntBASIC5.1□□□□□ -1.59
HOXC8P31273 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC8P31273 AC009963.2-201ENST00000453431 138 ntBASIC5.1□□□□□ -1.59
HOXC8P31273 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC8P31273 RN7SL41P-201ENST00000476144 297 ntBASIC5.1□□□□□ -1.59
HOXC8P31273 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC8P31273 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC8P31273 RPS27AP16-201ENST00000492222 470 ntBASIC5.1□□□□□ -1.59
HOXC8P31273 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXC8P31273 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC8P31273 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.1□□□□□ -1.59
HOXC8P31273 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC8P31273 OR4R2P-201ENST00000530815 597 ntBASIC5.1□□□□□ -1.59
HOXC8P31273 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC8P31273 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC8P31273 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC8P31273 BX005019.1-201ENST00000561881 1810 ntBASIC5.1□□□□□ -1.59
HOXC8P31273 MIR3160-1-201ENST00000577972 85 ntBASIC5.1□□□□□ -1.59
HOXC8P31273 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC8P31273 MIR3138-201ENST00000585238 82 ntBASIC5.1□□□□□ -1.59
HOXC8P31273 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC8P31273 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC8P31273 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXC8P31273 BNIP3P39-201ENST00000601077 554 ntBASIC5.1□□□□□ -1.59
HOXC8P31273 SUMO2P14-201ENST00000604488 293 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms