Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 SNORA58B-201ENST00000364259 136 ntBASIC3.59□□□□□ -1.83
CTSDP07339 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.59□□□□□ -1.83
CTSDP07339 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.59□□□□□ -1.83
CTSDP07339 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC3.59□□□□□ -1.83
CTSDP07339 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.59□□□□□ -1.83
CTSDP07339 AC004074.1-201ENST00000421810 1063 ntBASIC3.59□□□□□ -1.83
CTSDP07339 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.59□□□□□ -1.83
CTSDP07339 AL391219.1-201ENST00000422570 483 ntBASIC3.59□□□□□ -1.83
CTSDP07339 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.59□□□□□ -1.83
CTSDP07339 AP001324.1-201ENST00000428553 399 ntBASIC3.59□□□□□ -1.83
CTSDP07339 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.59□□□□□ -1.83
CTSDP07339 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CTSDP07339 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.59□□□□□ -1.83
CTSDP07339 AL132765.1-201ENST00000434165 553 ntBASIC3.59□□□□□ -1.83
CTSDP07339 AC008072.1-201ENST00000434254 824 ntBASIC3.59□□□□□ -1.83
CTSDP07339 LYPLA1P1-201ENST00000434514 622 ntBASIC3.59□□□□□ -1.83
CTSDP07339 RPL23AP89-201ENST00000439324 255 ntBASIC3.59□□□□□ -1.83
CTSDP07339 HMGB3P22-202ENST00000451823 572 ntBASIC3.59□□□□□ -1.83
CTSDP07339 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.59□□□□□ -1.83
CTSDP07339 AC105918.1-201ENST00000474399 838 ntBASIC3.59□□□□□ -1.83
CTSDP07339 AC146944.2-203ENST00000502493 354 ntBASIC3.59□□□□□ -1.83
CTSDP07339 AC112184.1-201ENST00000505179 312 ntBASIC3.59□□□□□ -1.83
CTSDP07339 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.59□□□□□ -1.83
CTSDP07339 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.59□□□□□ -1.83
CTSDP07339 AC139495.1-202ENST00000513164 354 ntBASIC3.59□□□□□ -1.83
CTSDP07339 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.59□□□□□ -1.83
CTSDP07339 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.59□□□□□ -1.83
CTSDP07339 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CTSDP07339 SULT1C2P2-201ENST00000562517 294 ntBASIC3.59□□□□□ -1.83
CTSDP07339 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.59□□□□□ -1.83
CTSDP07339 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CTSDP07339 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.59□□□□□ -1.83
CTSDP07339 AC098935.2-201ENST00000604222 466 ntBASIC3.59□□□□□ -1.83
CTSDP07339 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC3.59□□□□□ -1.83
CTSDP07339 AC015908.5-201ENST00000623289 343 ntBASIC3.59□□□□□ -1.83
CTSDP07339 FP325313.1-201ENST00000638228 703 ntBASIC3.59□□□□□ -1.83
CTSDP07339 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CTSDP07339 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CTSDP07339 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CTSDP07339 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CTSDP07339 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
CTSDP07339 AC132825.1-201ENST00000463573 2247 ntBASIC3.59□□□□□ -1.84
CTSDP07339 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CTSDP07339 ZNF962P-201ENST00000443465 3140 ntBASIC3.59□□□□□ -1.84
CTSDP07339 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.59□□□□□ -1.84
CTSDP07339 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.59□□□□□ -1.84
CTSDP07339 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CTSDP07339 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTSDP07339 AC008725.1-201ENST00000605123 2263 ntBASIC3.58□□□□□ -1.84
CTSDP07339 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CTSDP07339 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CTSDP07339 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.58□□□□□ -1.84
CTSDP07339 SNORA3C-201ENST00000408792 125 ntBASIC3.58□□□□□ -1.84
CTSDP07339 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.58□□□□□ -1.84
CTSDP07339 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.58□□□□□ -1.84
CTSDP07339 EIF1P3-201ENST00000423841 334 ntBASIC3.58□□□□□ -1.84
CTSDP07339 NAP1L4P3-201ENST00000432820 1147 ntBASIC3.58□□□□□ -1.84
CTSDP07339 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.58□□□□□ -1.84
CTSDP07339 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.58□□□□□ -1.84
CTSDP07339 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.58□□□□□ -1.84
CTSDP07339 RAD23BP3-201ENST00000454157 1152 ntBASIC3.58□□□□□ -1.84
CTSDP07339 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.58□□□□□ -1.84
CTSDP07339 AC104164.2-201ENST00000496953 495 ntBASIC3.58□□□□□ -1.84
CTSDP07339 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.58□□□□□ -1.84
CTSDP07339 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.58□□□□□ -1.84
CTSDP07339 ATP1B1P1-201ENST00000509767 915 ntBASIC3.58□□□□□ -1.84
CTSDP07339 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CTSDP07339 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.58□□□□□ -1.84
CTSDP07339 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.58□□□□□ -1.84
CTSDP07339 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.58□□□□□ -1.84
CTSDP07339 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
CTSDP07339 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.58□□□□□ -1.84
CTSDP07339 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.58□□□□□ -1.84
CTSDP07339 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.58□□□□□ -1.84
CTSDP07339 AC008536.1-201ENST00000602872 669 ntBASIC3.58□□□□□ -1.84
CTSDP07339 AC064801.1-201ENST00000612025 407 ntBASIC3.58□□□□□ -1.84
CTSDP07339 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.58□□□□□ -1.84
CTSDP07339 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.58□□□□□ -1.84
CTSDP07339 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.58□□□□□ -1.84
CTSDP07339 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CTSDP07339 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.58□□□□□ -1.84
CTSDP07339 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTSDP07339 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CTSDP07339 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTSDP07339 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CTSDP07339 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.58□□□□□ -1.84
CTSDP07339 AC010300.1-201ENST00000600671 5134 ntBASIC3.57□□□□□ -1.84
CTSDP07339 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CTSDP07339 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CTSDP07339 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CTSDP07339 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.57□□□□□ -1.84
CTSDP07339 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CTSDP07339 AL590240.1-201ENST00000334118 313 ntBASIC3.57□□□□□ -1.84
CTSDP07339 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.57□□□□□ -1.84
CTSDP07339 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CTSDP07339 MIR3065-201ENST00000390137 79 ntBASIC3.57□□□□□ -1.84
CTSDP07339 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CTSDP07339 ZNF603P-201ENST00000405613 487 ntBASIC3.57□□□□□ -1.84
CTSDP07339 PTP4A1P1-201ENST00000420539 515 ntBASIC3.57□□□□□ -1.84
CTSDP07339 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms