Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.38□□□□□ -1.39
PDGFAP04085 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PDGFAP04085 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 ZC3H11B-201ENST00000367211 2994 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
PDGFAP04085 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PDGFAP04085 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 OR52B1P-201ENST00000316506 909 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.38□□□□□ -1.39
PDGFAP04085 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.38□□□□□ -1.39
PDGFAP04085 RNU6-451P-201ENST00000362921 107 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 AC087752.1-201ENST00000391360 558 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 AL590635.1-201ENST00000406314 586 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 RN7SKP86-201ENST00000410454 332 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFAP04085 AL133384.1-201ENST00000412744 351 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 UQCRHP1-204ENST00000424609 274 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 GAPDHP37-201ENST00000442317 968 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 AC097359.1-201ENST00000447946 463 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 RPL7P15-201ENST00000461190 712 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 RPS26P11-201ENST00000463445 348 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 AC026336.1-201ENST00000466577 351 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 AC083798.1-201ENST00000472671 131 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 RPS26P6-201ENST00000475156 348 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 AC034222.1-201ENST00000494052 532 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 AC087752.2-201ENST00000521219 281 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.38□□□□□ -1.39
PDGFAP04085 RGS5-220ENST00000528689 566 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFAP04085 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFAP04085 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.38□□□□□ -1.39
PDGFAP04085 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
PDGFAP04085 NPM1P42-201ENST00000560329 862 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.38□□□□□ -1.39
PDGFAP04085 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC6.38□□□□□ -1.39
PDGFAP04085 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFAP04085 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.38□□□□□ -1.39
PDGFAP04085 COX6CP4-201ENST00000605798 228 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.38□□□□□ -1.39
PDGFAP04085 AC243654.2-201ENST00000612843 443 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 SAMMSON-227ENST00000642114 1199 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.38□□□□□ -1.39
PDGFAP04085 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 NMD3P1-201ENST00000439704 1488 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 AP000473.2-201ENST00000602659 1537 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
PDGFAP04085 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
PDGFAP04085 CKAP2P1-201ENST00000555477 2049 ntBASIC6.38□□□□□ -1.39
PDGFAP04085 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.38□□□□□ -1.39
PDGFAP04085 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.38□□□□□ -1.39
PDGFAP04085 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
PDGFAP04085 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
PDGFAP04085 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
PDGFAP04085 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFAP04085 OLMALINC-203ENST00000641087 3779 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFAP04085 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
PDGFAP04085 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFAP04085 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PDGFAP04085 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFAP04085 AL590065.1-201ENST00000603371 4774 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.37□□□□□ -1.39
PDGFAP04085 LINC00622-201ENST00000562811 1570 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFAP04085 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFAP04085 RBPJP2-201ENST00000618187 1444 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
PDGFAP04085 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
PDGFAP04085 Y_RNA.157-201ENST00000363638 102 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 RN7SKP15-201ENST00000364742 309 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 AL451142.1-201ENST00000375867 775 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 RNU6-730P-201ENST00000383954 104 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 RNU6-921P-201ENST00000384361 107 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 AL031679.1-201ENST00000400616 525 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 RPL34P19-201ENST00000415903 342 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFAP04085 MRPL50P2-201ENST00000416821 482 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 MTATP6P18-201ENST00000417994 673 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFAP04085 AL353777.1-201ENST00000425552 326 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFAP04085 AC079807.1-201ENST00000429993 481 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFAP04085 AC002381.1-201ENST00000447049 280 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 GAPDHP14-201ENST00000450472 937 ntBASIC6.37□□□□□ -1.39
PDGFAP04085 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.37□□□□□ -1.39
PDGFAP04085 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.37□□□□□ -1.39
PDGFAP04085 AKR1D1P1-201ENST00000457236 936 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms