Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
VPS4BO75351 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.37□□□□□ -1.55
VPS4BO75351 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS4BO75351 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VPS4BO75351 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS4BO75351 AC144833.1-201ENST00000567953 4089 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS4BO75351 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
VPS4BO75351 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS4BO75351 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS4BO75351 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS4BO75351 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS4BO75351 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
VPS4BO75351 SNORD116-9-201ENST00000384000 95 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 SNORD116-3-201ENST00000384287 95 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 SNORD116-7-201ENST00000384404 95 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 SNORD116-5-201ENST00000384462 95 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 MIR137-201ENST00000385223 102 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 AL645927.1-201ENST00000396783 406 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 AC016907.1-201ENST00000419483 435 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 RPL7P53-201ENST00000421245 739 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS4BO75351 AC007161.1-204ENST00000423039 460 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS4BO75351 MTND4P20-201ENST00000424125 869 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS4BO75351 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS4BO75351 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS4BO75351 CACYBPP1-201ENST00000438592 684 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 AC073387.1-201ENST00000453261 709 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 AL445669.2-201ENST00000454425 421 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS4BO75351 RPL35AP19-201ENST00000469425 329 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS4BO75351 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS4BO75351 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS4BO75351 RNU6-615P-201ENST00000516065 106 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS4BO75351 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
VPS4BO75351 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS4BO75351 IGLV3-30-201ENST00000524362 298 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.36□□□□□ -1.55
VPS4BO75351 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS4BO75351 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS4BO75351 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.36□□□□□ -1.55
VPS4BO75351 AC010198.2-201ENST00000550612 259 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 HMGN2P6-201ENST00000551091 273 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS4BO75351 MIR3912-201ENST00000577566 105 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 MIR5708-201ENST00000579723 85 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 AP001542.2-201ENST00000593141 364 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.36□□□□□ -1.55
VPS4BO75351 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS4BO75351 EIF1P6-201ENST00000600054 334 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS4BO75351 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 AL512329.2-201ENST00000607350 548 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 AC099676.1-201ENST00000608886 657 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 ZNF663P-202ENST00000641770 1131 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS4BO75351 AC004158.1-201ENST00000564508 4319 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
VPS4BO75351 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS4BO75351 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.36□□□□□ -1.55
VPS4BO75351 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
VPS4BO75351 TTC39DP-201ENST00000416781 1688 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 AC100757.1-201ENST00000616872 1835 ntBASIC5.36□□□□□ -1.55
VPS4BO75351 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
VPS4BO75351 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
VPS4BO75351 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
VPS4BO75351 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS4BO75351 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS4BO75351 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
VPS4BO75351 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS4BO75351 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.36□□□□□ -1.55
VPS4BO75351 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
VPS4BO75351 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS4BO75351 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VPS4BO75351 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VPS4BO75351 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VPS4BO75351 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS4BO75351 PABPC1P6-201ENST00000445594 1829 ntBASIC5.35□□□□□ -1.55
VPS4BO75351 AL137100.1-201ENST00000556703 1620 ntBASIC5.35□□□□□ -1.55
VPS4BO75351 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VPS4BO75351 RNU6-1320P-201ENST00000390838 107 ntBASIC5.35□□□□□ -1.55
VPS4BO75351 RNU6-1269P-201ENST00000391139 107 ntBASIC5.35□□□□□ -1.55
VPS4BO75351 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS4BO75351 PTP4A1P5-201ENST00000420305 455 ntBASIC5.35□□□□□ -1.55
VPS4BO75351 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS4BO75351 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.35□□□□□ -1.55
VPS4BO75351 HSPD1P12-201ENST00000429127 1069 ntBASIC5.35□□□□□ -1.55
VPS4BO75351 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS4BO75351 CDY14P-201ENST00000431260 1014 ntBASIC5.35□□□□□ -1.55
VPS4BO75351 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS4BO75351 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.35□□□□□ -1.55
VPS4BO75351 H2AFZP6-201ENST00000444403 394 ntBASIC5.35□□□□□ -1.55
VPS4BO75351 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.35□□□□□ -1.55
VPS4BO75351 CDY23P-201ENST00000451661 1014 ntBASIC5.35□□□□□ -1.55
VPS4BO75351 OR52E3P-201ENST00000452083 936 ntBASIC5.35□□□□□ -1.55
VPS4BO75351 MRPL42P4-201ENST00000453267 443 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms