Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX3O60493 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX3O60493 DNAJC19P3-201ENST00000594491 331 ntBASIC4.54□□□□□ -1.68
SNX3O60493 AC018618.2-201ENST00000604770 446 ntBASIC4.54□□□□□ -1.68
SNX3O60493 AC011374.2-201ENST00000607135 526 ntBASIC4.54□□□□□ -1.68
SNX3O60493 AC005840.5-201ENST00000619166 599 ntBASIC4.54□□□□□ -1.68
SNX3O60493 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.54□□□□□ -1.68
SNX3O60493 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.54□□□□□ -1.68
SNX3O60493 MIR4727-201ENST00000622232 55 ntBASIC4.54□□□□□ -1.68
SNX3O60493 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.54□□□□□ -1.68
SNX3O60493 AP000943.4-201ENST00000622912 357 ntBASIC4.54□□□□□ -1.68
SNX3O60493 AC068880.4-201ENST00000623082 495 ntBASIC4.54□□□□□ -1.68
SNX3O60493 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.54□□□□□ -1.68
SNX3O60493 AL691477.1-201ENST00000624398 162 ntBASIC4.54□□□□□ -1.68
SNX3O60493 AC024023.1-201ENST00000624530 922 ntBASIC4.54□□□□□ -1.68
SNX3O60493 CR381572.2-201ENST00000624852 397 ntBASIC4.54□□□□□ -1.68
SNX3O60493 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.54□□□□□ -1.68
SNX3O60493 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.54□□□□□ -1.68
SNX3O60493 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX3O60493 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SNX3O60493 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SNX3O60493 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SNX3O60493 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.54□□□□□ -1.68
SNX3O60493 AC093775.1-201ENST00000624154 1868 ntBASIC4.54□□□□□ -1.68
SNX3O60493 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX3O60493 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SNX3O60493 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
SNX3O60493 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX3O60493 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.53□□□□□ -1.68
SNX3O60493 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX3O60493 AC023490.2-201ENST00000359859 470 ntBASIC4.53□□□□□ -1.68
SNX3O60493 RN7SKP160-201ENST00000363804 340 ntBASIC4.53□□□□□ -1.68
SNX3O60493 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SNX3O60493 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SNX3O60493 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.53□□□□□ -1.68
SNX3O60493 OR7E156P-201ENST00000400303 464 ntBASIC4.53□□□□□ -1.68
SNX3O60493 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.53□□□□□ -1.68
SNX3O60493 UQCRFS1P3-201ENST00000407697 385 ntBASIC4.53□□□□□ -1.68
SNX3O60493 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.53□□□□□ -1.68
SNX3O60493 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX3O60493 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.53□□□□□ -1.68
SNX3O60493 RPL23AP25-201ENST00000430973 463 ntBASIC4.53□□□□□ -1.68
SNX3O60493 DNAJA1P5-201ENST00000440278 943 ntBASIC4.53□□□□□ -1.68
SNX3O60493 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.53□□□□□ -1.68
SNX3O60493 AL137845.2-201ENST00000444292 988 ntBASIC4.53□□□□□ -1.68
SNX3O60493 RPL36AP39-201ENST00000445859 318 ntBASIC4.53□□□□□ -1.68
SNX3O60493 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.53□□□□□ -1.68
SNX3O60493 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX3O60493 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.53□□□□□ -1.68
SNX3O60493 AC090142.1-201ENST00000465776 462 ntBASIC4.53□□□□□ -1.68
SNX3O60493 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX3O60493 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.53□□□□□ -1.68
SNX3O60493 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.53□□□□□ -1.68
SNX3O60493 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.53□□□□□ -1.68
SNX3O60493 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX3O60493 AC027544.3-201ENST00000535082 757 ntBASIC4.53□□□□□ -1.68
SNX3O60493 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX3O60493 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.53□□□□□ -1.68
SNX3O60493 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.53□□□□□ -1.68
SNX3O60493 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.53□□□□□ -1.68
SNX3O60493 SULT1C2P2-201ENST00000562517 294 ntBASIC4.53□□□□□ -1.68
SNX3O60493 AC134669.1-201ENST00000581275 672 ntBASIC4.53□□□□□ -1.68
SNX3O60493 AC011453.2-201ENST00000603737 729 ntBASIC4.53□□□□□ -1.68
SNX3O60493 AC079610.2-201ENST00000604818 690 ntBASIC4.53□□□□□ -1.68
SNX3O60493 AC100767.2-201ENST00000604840 693 ntBASIC4.53□□□□□ -1.68
SNX3O60493 AC007497.1-201ENST00000610421 561 ntBASIC4.53□□□□□ -1.68
SNX3O60493 RMST_10.1-201ENST00000616309 154 ntBASIC4.53□□□□□ -1.68
SNX3O60493 uc_338.9-201ENST00000617424 182 ntBASIC4.53□□□□□ -1.68
SNX3O60493 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SNX3O60493 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX3O60493 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.53□□□□□ -1.68
SNX3O60493 AC136428.4-201ENST00000634254 1155 ntBASIC4.53□□□□□ -1.68
SNX3O60493 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SNX3O60493 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX3O60493 IQCB2P-201ENST00000401788 1633 ntBASIC4.53□□□□□ -1.68
SNX3O60493 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX3O60493 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SNX3O60493 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.52□□□□□ -1.69
SNX3O60493 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
SNX3O60493 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
SNX3O60493 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SNX3O60493 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SNX3O60493 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNX3O60493 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
SNX3O60493 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
SNX3O60493 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SNX3O60493 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.52□□□□□ -1.69
SNX3O60493 RNU1-63P-201ENST00000383902 164 ntBASIC4.52□□□□□ -1.69
SNX3O60493 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SNX3O60493 RN7SKP59-201ENST00000410520 314 ntBASIC4.52□□□□□ -1.69
SNX3O60493 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.52□□□□□ -1.69
SNX3O60493 AC062016.2-201ENST00000420950 676 ntBASIC4.52□□□□□ -1.69
SNX3O60493 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.52□□□□□ -1.69
SNX3O60493 MTCO3P21-201ENST00000430791 643 ntBASIC4.52□□□□□ -1.69
SNX3O60493 MTCO1P43-201ENST00000431831 488 ntBASIC4.52□□□□□ -1.69
SNX3O60493 MRPL50P1-201ENST00000431951 384 ntBASIC4.52□□□□□ -1.69
SNX3O60493 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.52□□□□□ -1.69
SNX3O60493 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.52□□□□□ -1.69
SNX3O60493 RHOT1P3-201ENST00000436571 331 ntBASIC4.52□□□□□ -1.69
SNX3O60493 ELOCP8-201ENST00000439309 332 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms