Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 RNA5SP346-201ENST00000363541 121 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 Y_RNA.408-201ENST00000383987 102 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 RPL11P3-201ENST00000395256 523 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 RN7SKP59-201ENST00000410520 314 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 RN7SKP279-201ENST00000411383 298 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 BX276092.6-201ENST00000430476 250 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 MTND1P28-201ENST00000435623 950 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 OR3D1P-201ENST00000438288 955 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 SNRPEP8-201ENST00000442866 260 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 RPS26P30-201ENST00000443431 335 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 PPIAP20-201ENST00000449839 135 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 BX276092.8-201ENST00000455722 250 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 VPS26AP1-201ENST00000483197 979 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AC093815.1-201ENST00000508637 280 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AC074344.1-201ENST00000512823 224 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 RN7SKP288-201ENST00000516227 268 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 RNU6-1225P-201ENST00000516336 65 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AC068305.2-201ENST00000550567 1205 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 LINC00556-201ENST00000569603 412 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 BNIP3P33-201ENST00000598912 569 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 IMMP1LP1-201ENST00000605170 488 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AC007014.2-201ENST00000615581 479 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AC015726.3-201ENST00000624501 418 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AC099654.14-201ENST00000638599 341 ntBASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
FOXP3Q9BZS1 AC106872.5-201ENST00000508856 1416 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AL359955.1-201ENST00000455242 3275 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 ELF2P3-201ENST00000445099 1506 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AC005522.1-201ENST00000395416 346 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 NCSTNP1-201ENST00000406229 144 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AC092745.2-202ENST00000411880 369 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 NPM1P4-201ENST00000414095 812 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AL050321.1-201ENST00000432363 400 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 RPS25P9-201ENST00000435591 252 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 LARP1BP3-201ENST00000437229 869 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 CYCSP51-201ENST00000443545 318 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 NANOGNBP1-201ENST00000448444 480 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 EPS15P1-201ENST00000448836 336 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 PNPLA4P1-201ENST00000458328 305 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 OR7E99P-201ENST00000505750 922 ntBASIC6.16□□□□□ -1.42
FOXP3Q9BZS1 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms