Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 MIR3614-201ENST00000581261 86 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 ADAD1P2-201ENST00000588476 646 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AC015982.1-201ENST00000608113 465 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 MFSD8-242ENST00000641690 4199 ntBASIC3.32□□□□□ -1.88
AP1S3Q96PC3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AP1S3Q96PC3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AC139769.1-204ENST00000472297 1931 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AC108467.2-201ENST00000617640 1597 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 MIR423-201ENST00000362201 94 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 RNU6-146P-201ENST00000384602 108 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 U3.25-201ENST00000391209 220 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 MIR1282-201ENST00000408865 101 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 RPL23AP26-201ENST00000412728 464 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AL645608.4-201ENST00000423619 154 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 FTH1P6-201ENST00000430768 320 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AC010733.1-201ENST00000451515 401 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 CLIC4P1-201ENST00000453177 535 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 ISCUP1-201ENST00000454451 448 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 COPS8P2-201ENST00000473228 627 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AC016687.1-201ENST00000482574 353 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 RN7SKP66-201ENST00000516681 231 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 RN7SKP147-201ENST00000517154 244 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 IGHVII-60-1-201ENST00000519079 256 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AL360157.1-201ENST00000565962 87 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AC010680.3-201ENST00000604215 520 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AL034351.1-201ENST00000605288 668 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 MIR6861-201ENST00000618657 64 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AC004808.2-201ENST00000627965 773 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 FAM35DP-201ENST00000323387 2712 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 NXPH1-205ENST00000602349 1953 ntBASIC3.31□□□□□ -1.88
AP1S3Q96PC3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
AP1S3Q96PC3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 PABPC1P6-201ENST00000445594 1829 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 MFSD8-216ENST00000641147 4009 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 AC106871.1-201ENST00000568324 3102 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
AP1S3Q96PC3 XIAPP3-201ENST00000312918 795 ntBASIC3.3□□□□□ -1.88
AP1S3Q96PC3 RNA5SP388-201ENST00000362584 119 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms