Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 U3.2-201ENST00000362981 210 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 RNU6-249P-201ENST00000363016 102 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 UBE2V1P11-201ENST00000411559 285 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC007738.1-201ENST00000413892 348 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 CYCSP10-201ENST00000417973 294 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC108075.1-201ENST00000424692 529 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 COX6CP13-201ENST00000428703 226 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AL121776.1-201ENST00000429337 372 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC005189.1-201ENST00000431286 310 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 CFL1P1-202ENST00000432948 411 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 SPRYD7P1-201ENST00000443861 570 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC004022.1-201ENST00000447766 1066 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 PTGES3P5-201ENST00000455109 434 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AL136038.1-201ENST00000497246 351 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC104109.1-201ENST00000498563 436 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC026414.1-201ENST00000504046 698 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC117522.2-201ENST00000510049 657 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 RNU6-1028P-201ENST00000517164 93 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 OSBPL9P5-201ENST00000542581 171 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 CCDC58P3-201ENST00000590792 430 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 VN1R78P-201ENST00000597393 564 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC100847.1-201ENST00000611316 481 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 RPSAP73-201ENST00000614820 330 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 BX005214.3-202ENST00000619809 325 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC078883.4-201ENST00000623218 367 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC011493.1-201ENST00000596753 1632 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 AC107021.2-201ENST00000567714 2095 ntBASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLIP4Q8N3C7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 SPATA2P1-201ENST00000431223 2055 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 MIR323A-201ENST00000362199 86 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 RNU4-68P-201ENST00000364314 141 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 SNORA2.3-201ENST00000383920 135 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 AL021331.1-201ENST00000402817 582 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 RPL7P27-201ENST00000403775 720 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 OR3A2-201ENST00000408891 1076 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 RNU4-22P-201ENST00000411058 166 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 AL590806.1-201ENST00000415818 853 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 GTF2IP3-201ENST00000433887 494 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 BTF3P6-201ENST00000448054 499 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 HMGB1P5-202ENST00000451497 985 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 RN7SKP46-201ENST00000515942 234 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 MRPS36P3-201ENST00000519284 130 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 AC007834.2-201ENST00000536310 343 ntBASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.7□□□□□ -1.66
CLIP4Q8N3C7 RN7SL176P-201ENST00000580352 264 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms