Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX30Q5VWJ9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNX30Q5VWJ9 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.22□□□□□ -1.57
SNX30Q5VWJ9 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SNX30Q5VWJ9 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.21□□□□□ -1.57
SNX30Q5VWJ9 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
SNX30Q5VWJ9 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
SNX30Q5VWJ9 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.21□□□□□ -1.57
SNX30Q5VWJ9 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 RNU6-1005P-201ENST00000384519 107 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 RNU6-178P-201ENST00000384631 104 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AC093719.1-202ENST00000392735 373 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AL035419.1-201ENST00000397037 564 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 ATF1P1-201ENST00000406040 927 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AF186996.5-201ENST00000418098 904 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 USP9YP9-201ENST00000429406 715 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AL049745.1-201ENST00000433953 286 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 RPL7AP61-201ENST00000443410 636 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AC091180.1-201ENST00000462104 372 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 HMGB3P16-201ENST00000508037 287 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AC138938.1-201ENST00000515431 782 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AP000916.1-201ENST00000533869 835 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AP003717.3-201ENST00000544832 1180 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AC104072.1-201ENST00000568817 668 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 ABI1P1-201ENST00000603375 1120 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AP005229.2-201ENST00000609980 697 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AP000648.2-201ENST00000624182 404 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AP003400.6-201ENST00000624698 740 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 CR381572.2-201ENST00000624852 397 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 MAPK10-349ENST00000641767 3661 ntBASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SNX30Q5VWJ9 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 PHKBP1-201ENST00000450951 1951 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 AL137100.1-201ENST00000556703 1620 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 MIR585-201ENST00000384887 94 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 U3.32-201ENST00000408116 212 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 RN7SKP247-201ENST00000411094 308 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 HMGB3P31-201ENST00000413333 595 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 AL360081.1-201ENST00000428299 555 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 TXNP5-201ENST00000441043 315 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 OR52J1P-201ENST00000450596 932 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 RPS17P2-201ENST00000461663 408 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 AC010285.3-201ENST00000511668 676 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 AC068339.2-201ENST00000534395 618 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 AC116447.1-201ENST00000613153 453 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 AC015914.2-201ENST00000618167 288 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 U6.48-201ENST00000618523 106 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 VN2R3P-201ENST00000422626 1412 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 ECM1P2-201ENST00000503354 1577 ntBASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SNX30Q5VWJ9 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms