Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
CDH4P55283 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH4P55283 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH4P55283 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CDH4P55283 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH4P55283 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
CDH4P55283 RNA5SP447-201ENST00000363749 119 ntBASIC4.61□□□□□ -1.67
CDH4P55283 RNU6-1251P-201ENST00000364502 107 ntBASIC4.61□□□□□ -1.67
CDH4P55283 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH4P55283 Y_RNA.625-201ENST00000411256 107 ntBASIC4.61□□□□□ -1.67
CDH4P55283 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH4P55283 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH4P55283 PTMAP3-201ENST00000447474 330 ntBASIC4.61□□□□□ -1.67
CDH4P55283 BUD31P2-201ENST00000449374 300 ntBASIC4.61□□□□□ -1.67
CDH4P55283 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH4P55283 Z95152.1-201ENST00000453556 656 ntBASIC4.61□□□□□ -1.67
CDH4P55283 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH4P55283 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH4P55283 RNA5SP446-201ENST00000515955 82 ntBASIC4.61□□□□□ -1.67
CDH4P55283 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.61□□□□□ -1.67
CDH4P55283 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH4P55283 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH4P55283 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.61□□□□□ -1.67
CDH4P55283 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CDH4P55283 AP001160.4-201ENST00000596971 382 ntBASIC4.61□□□□□ -1.67
CDH4P55283 AL356218.2-201ENST00000605264 187 ntBASIC4.61□□□□□ -1.67
CDH4P55283 AC107905.1-201ENST00000616204 426 ntBASIC4.61□□□□□ -1.67
CDH4P55283 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH4P55283 OR2L1P-202ENST00000641567 1023 ntBASIC4.61□□□□□ -1.67
CDH4P55283 AC139769.1-204ENST00000472297 1931 ntBASIC4.61□□□□□ -1.67
CDH4P55283 AL450326.2-201ENST00000421913 1962 ntBASIC4.61□□□□□ -1.67
CDH4P55283 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH4P55283 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH4P55283 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH4P55283 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH4P55283 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH4P55283 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH4P55283 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH4P55283 MAPK10-303ENST00000641324 3959 ntBASIC4.61□□□□□ -1.67
CDH4P55283 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH4P55283 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH4P55283 AC139713.2-214ENST00000642059 1811 ntBASIC4.6□□□□□ -1.67
CDH4P55283 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH4P55283 AL672167.1-205ENST00000641112 3080 ntBASIC4.6□□□□□ -1.67
CDH4P55283 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH4P55283 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH4P55283 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH4P55283 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH4P55283 NCSTNP1-201ENST00000406229 144 ntBASIC4.6□□□□□ -1.67
CDH4P55283 NPM1P26-201ENST00000426339 738 ntBASIC4.6□□□□□ -1.67
CDH4P55283 RPL23AP25-201ENST00000430973 463 ntBASIC4.6□□□□□ -1.67
CDH4P55283 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH4P55283 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.6□□□□□ -1.67
CDH4P55283 AC053481.1-201ENST00000467217 306 ntBASIC4.6□□□□□ -1.67
CDH4P55283 RN7SL481P-201ENST00000477764 299 ntBASIC4.6□□□□□ -1.67
CDH4P55283 RN7SL809P-201ENST00000482040 297 ntBASIC4.6□□□□□ -1.67
CDH4P55283 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH4P55283 AC013356.1-201ENST00000489027 564 ntBASIC4.6□□□□□ -1.67
CDH4P55283 RPS4XP18-201ENST00000495480 763 ntBASIC4.6□□□□□ -1.67
CDH4P55283 HAUS1P1-201ENST00000505275 832 ntBASIC4.6□□□□□ -1.67
CDH4P55283 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.6□□□□□ -1.67
CDH4P55283 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH4P55283 RNA5SP497-201ENST00000516081 97 ntBASIC4.6□□□□□ -1.67
CDH4P55283 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH4P55283 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH4P55283 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.6□□□□□ -1.67
CDH4P55283 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH4P55283 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH4P55283 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH4P55283 RPL26P30-202ENST00000602923 645 ntBASIC4.6□□□□□ -1.67
CDH4P55283 AC020634.1-201ENST00000608701 549 ntBASIC4.6□□□□□ -1.67
CDH4P55283 AC091905.2-201ENST00000623143 306 ntBASIC4.6□□□□□ -1.67
CDH4P55283 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH4P55283 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH4P55283 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
CDH4P55283 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CDH4P55283 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CDH4P55283 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
CDH4P55283 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH4P55283 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH4P55283 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH4P55283 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
CDH4P55283 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH4P55283 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CDH4P55283 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CDH4P55283 RNU6-891P-201ENST00000384280 111 ntBASIC4.59□□□□□ -1.67
CDH4P55283 SNORD65-201ENST00000391079 73 ntBASIC4.59□□□□□ -1.67
CDH4P55283 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CDH4P55283 RPL23AP59-201ENST00000399415 461 ntBASIC4.59□□□□□ -1.67
CDH4P55283 AL034374.1-201ENST00000406329 351 ntBASIC4.59□□□□□ -1.67
CDH4P55283 TMSB10P2-201ENST00000416049 131 ntBASIC4.59□□□□□ -1.67
CDH4P55283 AC009302.1-201ENST00000417147 390 ntBASIC4.59□□□□□ -1.67
CDH4P55283 AC062016.2-201ENST00000420950 676 ntBASIC4.59□□□□□ -1.67
CDH4P55283 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.59□□□□□ -1.67
CDH4P55283 HSPD1P14-201ENST00000432666 1618 ntBASIC4.59□□□□□ -1.67
CDH4P55283 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.59□□□□□ -1.67
CDH4P55283 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.59□□□□□ -1.67
CDH4P55283 AL157884.3-201ENST00000448273 1184 ntBASIC4.59□□□□□ -1.67
CDH4P55283 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.59□□□□□ -1.67
CDH4P55283 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms