Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC040958.1-201ENST00000561102 201 ntBASIC5.52□□□□□ -1.53
NEK3P51956 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.52□□□□□ -1.53
NEK3P51956 MTCYBP13-201ENST00000578634 1093 ntBASIC5.52□□□□□ -1.53
NEK3P51956 MIR1269B-201ENST00000580405 75 ntBASIC5.52□□□□□ -1.53
NEK3P51956 OR7E18P-201ENST00000592589 702 ntBASIC5.52□□□□□ -1.53
NEK3P51956 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.52□□□□□ -1.53
NEK3P51956 AC068790.7-201ENST00000602347 528 ntBASIC5.52□□□□□ -1.53
NEK3P51956 AL512329.2-201ENST00000607350 548 ntBASIC5.52□□□□□ -1.53
NEK3P51956 AP005137.2-201ENST00000609238 400 ntBASIC5.52□□□□□ -1.53
NEK3P51956 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.52□□□□□ -1.53
NEK3P51956 AC136428.4-201ENST00000634254 1155 ntBASIC5.52□□□□□ -1.53
NEK3P51956 MFSD8-245ENST00000641743 948 ntBASIC5.52□□□□□ -1.53
NEK3P51956 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
NEK3P51956 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NEK3P51956 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NEK3P51956 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NEK3P51956 ASNSP1-201ENST00000518311 1939 ntBASIC5.52□□□□□ -1.53
NEK3P51956 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
NEK3P51956 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.52□□□□□ -1.53
NEK3P51956 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
NEK3P51956 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.51□□□□□ -1.53
NEK3P51956 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NEK3P51956 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NEK3P51956 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NEK3P51956 SNORD116-12-201ENST00000384468 92 ntBASIC5.51□□□□□ -1.53
NEK3P51956 RPL35AP24-201ENST00000413846 330 ntBASIC5.51□□□□□ -1.53
NEK3P51956 GNG5P5-201ENST00000420444 220 ntBASIC5.51□□□□□ -1.53
NEK3P51956 AC007394.1-201ENST00000421941 531 ntBASIC5.51□□□□□ -1.53
NEK3P51956 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.51□□□□□ -1.53
NEK3P51956 CEACAMP1-201ENST00000434624 1035 ntBASIC5.51□□□□□ -1.53
NEK3P51956 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.51□□□□□ -1.53
NEK3P51956 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.51□□□□□ -1.53
NEK3P51956 VN1R25P-201ENST00000443385 738 ntBASIC5.51□□□□□ -1.53
NEK3P51956 AL589880.1-201ENST00000448271 287 ntBASIC5.51□□□□□ -1.53
NEK3P51956 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.51□□□□□ -1.53
NEK3P51956 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.51□□□□□ -1.53
NEK3P51956 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.51□□□□□ -1.53
NEK3P51956 RPL23AP44-201ENST00000482216 473 ntBASIC5.51□□□□□ -1.53
NEK3P51956 UBA52P3-201ENST00000491303 382 ntBASIC5.51□□□□□ -1.53
NEK3P51956 FTH1P24-201ENST00000503502 462 ntBASIC5.51□□□□□ -1.53
NEK3P51956 ENPP7P11-201ENST00000505915 627 ntBASIC5.51□□□□□ -1.53
NEK3P51956 AC008638.1-201ENST00000506035 866 ntBASIC5.51□□□□□ -1.53
NEK3P51956 MTND6P2-201ENST00000512226 524 ntBASIC5.51□□□□□ -1.53
NEK3P51956 RNU6-488P-201ENST00000515918 99 ntBASIC5.51□□□□□ -1.53
NEK3P51956 SNORD116-26-201ENST00000516006 96 ntBASIC5.51□□□□□ -1.53
NEK3P51956 SCARNA16.4-201ENST00000516956 187 ntBASIC5.51□□□□□ -1.53
NEK3P51956 SCARNA20.4-201ENST00000516969 131 ntBASIC5.51□□□□□ -1.53
NEK3P51956 AF279873.1-201ENST00000523393 313 ntBASIC5.51□□□□□ -1.53
NEK3P51956 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.51□□□□□ -1.53
NEK3P51956 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
NEK3P51956 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.51□□□□□ -1.53
NEK3P51956 AC007448.1-201ENST00000582714 234 ntBASIC5.51□□□□□ -1.53
NEK3P51956 AC017100.2-201ENST00000584628 355 ntBASIC5.51□□□□□ -1.53
NEK3P51956 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.51□□□□□ -1.53
NEK3P51956 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.51□□□□□ -1.53
NEK3P51956 AC009237.15-201ENST00000610252 501 ntBASIC5.51□□□□□ -1.53
NEK3P51956 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NEK3P51956 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.51□□□□□ -1.53
NEK3P51956 AL157770.1-201ENST00000623049 439 ntBASIC5.51□□□□□ -1.53
NEK3P51956 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.51□□□□□ -1.53
NEK3P51956 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.51□□□□□ -1.53
NEK3P51956 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.51□□□□□ -1.53
NEK3P51956 AL590763.1-201ENST00000398297 1545 ntBASIC5.51□□□□□ -1.53
NEK3P51956 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.51□□□□□ -1.53
NEK3P51956 SAGE2P-201ENST00000420011 2126 ntBASIC5.51□□□□□ -1.53
NEK3P51956 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NEK3P51956 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NEK3P51956 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NEK3P51956 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NEK3P51956 PABPC1P6-201ENST00000445594 1829 ntBASIC5.51□□□□□ -1.53
NEK3P51956 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.5□□□□□ -1.53
NEK3P51956 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NEK3P51956 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NEK3P51956 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
NEK3P51956 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NEK3P51956 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NEK3P51956 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NEK3P51956 HMGB1P5-201ENST00000255320 642 ntBASIC5.5□□□□□ -1.53
NEK3P51956 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NEK3P51956 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.5□□□□□ -1.53
NEK3P51956 MIR133B-201ENST00000362210 119 ntBASIC5.5□□□□□ -1.53
NEK3P51956 RNA5SP183-201ENST00000362452 119 ntBASIC5.5□□□□□ -1.53
NEK3P51956 RN7SKP224-201ENST00000364140 325 ntBASIC5.5□□□□□ -1.53
NEK3P51956 RNU6-171P-201ENST00000384354 107 ntBASIC5.5□□□□□ -1.53
NEK3P51956 SFR1P1-201ENST00000403720 688 ntBASIC5.5□□□□□ -1.53
NEK3P51956 PRRC2CP1-201ENST00000404428 159 ntBASIC5.5□□□□□ -1.53
NEK3P51956 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NEK3P51956 AL390774.1-201ENST00000411924 246 ntBASIC5.5□□□□□ -1.53
NEK3P51956 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.5□□□□□ -1.53
NEK3P51956 RPS3AP37-201ENST00000419176 745 ntBASIC5.5□□□□□ -1.53
NEK3P51956 SLC35E1P1-201ENST00000419313 864 ntBASIC5.5□□□□□ -1.53
NEK3P51956 PAICSP7-201ENST00000419829 962 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.5□□□□□ -1.53
NEK3P51956 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.5□□□□□ -1.53
NEK3P51956 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NEK3P51956 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.5□□□□□ -1.53
NEK3P51956 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.5□□□□□ -1.53
NEK3P51956 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.5□□□□□ -1.53
NEK3P51956 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.5□□□□□ -1.53
NEK3P51956 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms