Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RNU6-232P-201ENST00000517144 64 ntBASIC4.73□□□□□ -1.65
SOX2P48431 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.73□□□□□ -1.65
SOX2P48431 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.73□□□□□ -1.65
SOX2P48431 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.73□□□□□ -1.65
SOX2P48431 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.73□□□□□ -1.65
SOX2P48431 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.73□□□□□ -1.65
SOX2P48431 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.73□□□□□ -1.65
SOX2P48431 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.73□□□□□ -1.65
SOX2P48431 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SOX2P48431 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.73□□□□□ -1.65
SOX2P48431 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.73□□□□□ -1.65
SOX2P48431 DPPA2P4-201ENST00000563717 878 ntBASIC4.73□□□□□ -1.65
SOX2P48431 BPTFP1-201ENST00000579209 492 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AC138207.8-204ENST00000579588 527 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.73□□□□□ -1.65
SOX2P48431 AC090616.2-202ENST00000584248 222 ntBASIC4.73□□□□□ -1.65
SOX2P48431 DUXAP11-201ENST00000603858 526 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.73□□□□□ -1.65
SOX2P48431 AL451074.6-201ENST00000608512 729 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.73□□□□□ -1.65
SOX2P48431 RN7SL544P-201ENST00000617232 284 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.73□□□□□ -1.65
SOX2P48431 RN7SL763P-201ENST00000620922 284 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AP001962.1-201ENST00000624114 559 ntBASIC4.73□□□□□ -1.65
SOX2P48431 AP001052.1-201ENST00000626421 99 ntBASIC4.73□□□□□ -1.65
SOX2P48431 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
SOX2P48431 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SOX2P48431 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SOX2P48431 TRIM51GP-201ENST00000534741 1350 ntBASIC4.73□□□□□ -1.65
SOX2P48431 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.73□□□□□ -1.65
SOX2P48431 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SOX2P48431 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SOX2P48431 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SOX2P48431 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SOX2P48431 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.73□□□□□ -1.65
SOX2P48431 AP000776.1-201ENST00000530032 1663 ntBASIC4.73□□□□□ -1.65
SOX2P48431 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SOX2P48431 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SOX2P48431 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.73□□□□□ -1.65
SOX2P48431 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.73□□□□□ -1.65
SOX2P48431 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SOX2P48431 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX2P48431 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX2P48431 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX2P48431 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX2P48431 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SOX2P48431 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.72□□□□□ -1.65
SOX2P48431 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
SOX2P48431 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.72□□□□□ -1.65
SOX2P48431 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX2P48431 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.72□□□□□ -1.65
SOX2P48431 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX2P48431 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SOX2P48431 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX2P48431 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX2P48431 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX2P48431 RNU1-19P-201ENST00000363306 165 ntBASIC4.72□□□□□ -1.65
SOX2P48431 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SOX2P48431 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.72□□□□□ -1.65
SOX2P48431 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.72□□□□□ -1.65
SOX2P48431 MIR551A-201ENST00000385042 96 ntBASIC4.72□□□□□ -1.65
SOX2P48431 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SOX2P48431 AL590084.2-201ENST00000401481 382 ntBASIC4.72□□□□□ -1.65
SOX2P48431 RNA5SP296-201ENST00000410523 111 ntBASIC4.72□□□□□ -1.65
SOX2P48431 SETP15-201ENST00000412724 337 ntBASIC4.72□□□□□ -1.65
SOX2P48431 NRBF2P2-201ENST00000413087 861 ntBASIC4.72□□□□□ -1.65
SOX2P48431 AL596448.1-201ENST00000415024 392 ntBASIC4.72□□□□□ -1.65
SOX2P48431 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.72□□□□□ -1.65
SOX2P48431 AC098592.1-201ENST00000419352 333 ntBASIC4.72□□□□□ -1.65
SOX2P48431 AL035660.1-201ENST00000422041 222 ntBASIC4.72□□□□□ -1.65
SOX2P48431 MTCO1P54-201ENST00000430139 712 ntBASIC4.72□□□□□ -1.65
SOX2P48431 RPS24P8-201ENST00000431490 402 ntBASIC4.72□□□□□ -1.65
SOX2P48431 ATP5F1P1-201ENST00000433775 569 ntBASIC4.72□□□□□ -1.65
SOX2P48431 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX2P48431 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.72□□□□□ -1.65
SOX2P48431 AC118469.1-201ENST00000442943 488 ntBASIC4.72□□□□□ -1.65
SOX2P48431 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX2P48431 MTND2P4-201ENST00000445034 1004 ntBASIC4.72□□□□□ -1.65
SOX2P48431 TPTE2P5-203ENST00000458118 728 ntBASIC4.72□□□□□ -1.65
SOX2P48431 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX2P48431 RPL31P3-201ENST00000458430 332 ntBASIC4.72□□□□□ -1.65
SOX2P48431 BZW1P2-201ENST00000473537 826 ntBASIC4.72□□□□□ -1.65
SOX2P48431 COX6B1P2-201ENST00000489624 230 ntBASIC4.72□□□□□ -1.65
SOX2P48431 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.72□□□□□ -1.65
SOX2P48431 LSM3P4-201ENST00000502948 309 ntBASIC4.72□□□□□ -1.65
SOX2P48431 DYNLL1P6-201ENST00000503440 264 ntBASIC4.72□□□□□ -1.65
SOX2P48431 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.72□□□□□ -1.65
SOX2P48431 WBP1LP4-201ENST00000505043 344 ntBASIC4.72□□□□□ -1.65
SOX2P48431 AC025458.1-201ENST00000506046 166 ntBASIC4.72□□□□□ -1.65
SOX2P48431 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.72□□□□□ -1.65
SOX2P48431 RPL7L1P4-201ENST00000513004 707 ntBASIC4.72□□□□□ -1.65
SOX2P48431 EIF3KP3-201ENST00000514461 639 ntBASIC4.72□□□□□ -1.65
SOX2P48431 SNORA70.20-201ENST00000516848 126 ntBASIC4.72□□□□□ -1.65
SOX2P48431 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.72□□□□□ -1.65
SOX2P48431 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SOX2P48431 OR4C2P-201ENST00000530855 1064 ntBASIC4.72□□□□□ -1.65
SOX2P48431 AC027369.5-201ENST00000533838 755 ntBASIC4.72□□□□□ -1.65
SOX2P48431 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.72□□□□□ -1.65
SOX2P48431 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.72□□□□□ -1.65
SOX2P48431 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms