Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 MCM8-203ENST00000378886 3835 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HOXD11P31277 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HOXD11P31277 MYPN-205ENST00000613327 6116 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HOXD11P31277 HNRNPA1-203ENST00000546500 4121 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HOXD11P31277 FHAD1-206ENST00000375998 4355 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
HOXD11P31277 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
HOXD11P31277 KIAA0141-202ENST00000432126 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HOXD11P31277 HBE1-201ENST00000292896 827 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HOXD11P31277 IFT122-202ENST00000347300 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
HOXD11P31277 snoU2_19.4-201ENST00000364329 80 ntBASIC9.19□□□□□ -0.94
HOXD11P31277 RNU6-643P-201ENST00000384018 107 ntBASIC9.19□□□□□ -0.94
HOXD11P31277 RNU6-768P-201ENST00000384683 107 ntBASIC9.19□□□□□ -0.94
HOXD11P31277 TRAPPC2P9-201ENST00000434556 343 ntBASIC9.19□□□□□ -0.94
HOXD11P31277 FUNDC2P4-201ENST00000441207 421 ntBASIC9.19□□□□□ -0.94
HOXD11P31277 FHP1-201ENST00000442741 703 ntBASIC9.19□□□□□ -0.94
HOXD11P31277 SFTPA3P-201ENST00000446429 367 ntBASIC9.19□□□□□ -0.94
HOXD11P31277 AC005840.2-201ENST00000447193 355 ntBASIC9.19□□□□□ -0.94
HOXD11P31277 HSPE1P13-201ENST00000451143 297 ntBASIC9.19□□□□□ -0.94
HOXD11P31277 RPL23AP75-201ENST00000491601 451 ntBASIC9.19□□□□□ -0.94
HOXD11P31277 AC022493.1-201ENST00000492984 337 ntBASIC9.19□□□□□ -0.94
HOXD11P31277 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC9.19□□□□□ -0.94
HOXD11P31277 RNU6-1007P-201ENST00000516586 107 ntBASIC9.19□□□□□ -0.94
HOXD11P31277 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC9.19□□□□□ -0.94
HOXD11P31277 AC090241.1-201ENST00000587732 621 ntBASIC9.19□□□□□ -0.94
HOXD11P31277 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC9.19□□□□□ -0.94
HOXD11P31277 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC9.19□□□□□ -0.94
HOXD11P31277 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
HOXD11P31277 HIPK2-203ENST00000428878 3969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
HOXD11P31277 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
HOXD11P31277 FMN1-207ENST00000559047 4260 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
HOXD11P31277 RPAP3-201ENST00000005386 4370 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
HOXD11P31277 ERCC5-202ENST00000375954 2986 ntTSL 5 BASIC9.19□□□□□ -0.94
HOXD11P31277 COL6A3-201ENST00000295550 10749 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HOXD11P31277 PAPD4-201ENST00000296783 3129 ntAPPRIS P3 TSL 2 BASIC9.19□□□□□ -0.94
HOXD11P31277 ZNF641-202ENST00000448928 1856 ntTSL 2 BASIC9.19□□□□□ -0.94
HOXD11P31277 ABCB4-202ENST00000358400 3826 ntTSL 5 BASIC9.19□□□□□ -0.94
HOXD11P31277 TRIM16-211ENST00000577886 1979 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
HOXD11P31277 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC9.19□□□□□ -0.94
HOXD11P31277 ASCC1-202ENST00000317168 2002 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
HOXD11P31277 SERPINA12-201ENST00000341228 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
HOXD11P31277 SMARCD1-205ENST00000548573 2095 ntTSL 5 BASIC9.19□□□□□ -0.94
HOXD11P31277 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
HOXD11P31277 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC9.19□□□□□ -0.94
HOXD11P31277 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
HOXD11P31277 CLEC1A-201ENST00000315330 2685 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 PLP1-223ENST00000621218 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 BOC-201ENST00000273395 4276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 TTC14-203ENST00000412756 4568 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 ADIPOQ-202ENST00000444204 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
HOXD11P31277 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
HOXD11P31277 RNA5SP74-201ENST00000363538 109 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 SNORD115-32-201ENST00000364079 82 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 TRO-204ENST00000375041 3488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 AC073842.1-201ENST00000376482 342 ntTSL 5 BASIC9.18□□□□□ -0.94
HOXD11P31277 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 RNU6-820P-201ENST00000384273 107 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 MIR106B-201ENST00000385301 82 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 MIR1184-2-201ENST00000408263 99 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 MIR1184-1-201ENST00000408606 99 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 MIR1184-3-201ENST00000408676 99 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 AC126120.1-201ENST00000431082 470 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 EIF4BP6-201ENST00000431936 1828 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 CD44-210ENST00000434472 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 ACTBP12-201ENST00000435871 418 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 CYP2C58P-201ENST00000436281 475 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 HSPE1P21-201ENST00000438283 308 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC9.18□□□□□ -0.94
HOXD11P31277 MAPK10-210ENST00000449047 2382 ntTSL 5 BASIC9.18□□□□□ -0.94
HOXD11P31277 AL353705.4-201ENST00000449661 238 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 RN7SL741P-201ENST00000482473 289 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 AC074043.1-201ENST00000483126 1776 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC9.18□□□□□ -0.94
HOXD11P31277 AC027338.2-201ENST00000504382 526 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC9.18□□□□□ -0.94
HOXD11P31277 AC104619.3-201ENST00000509116 1387 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 LIMCH1-209ENST00000509277 3474 ntTSL 2 BASIC9.18□□□□□ -0.94
HOXD11P31277 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC9.18□□□□□ -0.94
HOXD11P31277 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 APPL2-213ENST00000551662 2190 ntTSL 2 BASIC9.18□□□□□ -0.94
HOXD11P31277 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 AC090079.1-201ENST00000572092 1183 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC9.18□□□□□ -0.94
HOXD11P31277 RN7SL246P-201ENST00000584467 296 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 AC090699.1-201ENST00000586264 321 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 RN7SL82P-201ENST00000611435 237 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 uc_338.35-201ENST00000616802 163 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 RN7SL628P-201ENST00000619139 237 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 HAO2-205ENST00000622548 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 AC100810.3-201ENST00000633189 2240 ntBASIC9.18□□□□□ -0.94
HOXD11P31277 CELF2-215ENST00000636488 3908 ntTSL 5 BASIC9.18□□□□□ -0.94
HOXD11P31277 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
HOXD11P31277 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
HOXD11P31277 ARHGEF9-237ENST00000638021 3876 ntTSL 5 BASIC9.18□□□□□ -0.94
HOXD11P31277 AFAP1L2-201ENST00000304129 3705 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 224.5 ms