Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGA1P17096 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGA1P17096 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HMGA1P17096 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGA1P17096 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGA1P17096 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HMGA1P17096 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGA1P17096 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGA1P17096 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA1P17096 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA1P17096 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA1P17096 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA1P17096 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA1P17096 RNU6-628P-201ENST00000410675 107 ntBASIC4.37□□□□□ -1.71
HMGA1P17096 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGA1P17096 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.37□□□□□ -1.71
HMGA1P17096 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGA1P17096 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGA1P17096 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA1P17096 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGA1P17096 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
HMGA1P17096 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.37□□□□□ -1.71
HMGA1P17096 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.37□□□□□ -1.71
HMGA1P17096 AC006363.1-201ENST00000603806 463 ntBASIC4.37□□□□□ -1.71
HMGA1P17096 AC099676.1-201ENST00000608886 657 ntBASIC4.37□□□□□ -1.71
HMGA1P17096 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.37□□□□□ -1.71
HMGA1P17096 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA1P17096 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA1P17096 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA1P17096 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.37□□□□□ -1.71
HMGA1P17096 CASC19-255ENST00000641733 1385 ntBASIC4.37□□□□□ -1.71
HMGA1P17096 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA1P17096 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA1P17096 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HMGA1P17096 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
HMGA1P17096 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.36□□□□□ -1.71
HMGA1P17096 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
HMGA1P17096 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HMGA1P17096 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGA1P17096 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGA1P17096 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGA1P17096 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HMGA1P17096 OR11H4-201ENST00000315409 1082 ntBASIC4.36□□□□□ -1.71
HMGA1P17096 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.36□□□□□ -1.71
HMGA1P17096 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
HMGA1P17096 TPT1P2-201ENST00000413105 503 ntBASIC4.36□□□□□ -1.71
HMGA1P17096 AL161631.1-201ENST00000417933 486 ntBASIC4.36□□□□□ -1.71
HMGA1P17096 RPL36AP36-201ENST00000418616 301 ntBASIC4.36□□□□□ -1.71
HMGA1P17096 RBMY1KP-201ENST00000423480 476 ntBASIC4.36□□□□□ -1.71
HMGA1P17096 AC115285.1-201ENST00000424879 736 ntBASIC4.36□□□□□ -1.71
HMGA1P17096 RPL23AP46-201ENST00000438548 490 ntBASIC4.36□□□□□ -1.71
HMGA1P17096 AL359073.1-201ENST00000448036 403 ntBASIC4.36□□□□□ -1.71
HMGA1P17096 TPT1P3-201ENST00000492841 512 ntBASIC4.36□□□□□ -1.71
HMGA1P17096 FTH1P21-201ENST00000512179 511 ntBASIC4.36□□□□□ -1.71
HMGA1P17096 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGA1P17096 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.36□□□□□ -1.71
HMGA1P17096 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGA1P17096 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.36□□□□□ -1.71
HMGA1P17096 PHBP17-201ENST00000528576 541 ntBASIC4.36□□□□□ -1.71
HMGA1P17096 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGA1P17096 AC008759.1-201ENST00000589783 983 ntBASIC4.36□□□□□ -1.71
HMGA1P17096 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.36□□□□□ -1.71
HMGA1P17096 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
HMGA1P17096 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HMGA1P17096 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGA1P17096 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.36□□□□□ -1.71
HMGA1P17096 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGA1P17096 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HMGA1P17096 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HMGA1P17096 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGA1P17096 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGA1P17096 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HMGA1P17096 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGA1P17096 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
HMGA1P17096 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGA1P17096 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGA1P17096 AC116667.1-201ENST00000604855 2072 ntBASIC4.35□□□□□ -1.71
HMGA1P17096 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HMGA1P17096 RNA5SP513-201ENST00000364648 118 ntBASIC4.35□□□□□ -1.71
HMGA1P17096 MIR1179-201ENST00000408703 91 ntBASIC4.35□□□□□ -1.71
HMGA1P17096 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HMGA1P17096 AP000357.1-201ENST00000409926 1165 ntBASIC4.35□□□□□ -1.71
HMGA1P17096 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGA1P17096 OR13Z1P-201ENST00000416141 834 ntBASIC4.35□□□□□ -1.71
HMGA1P17096 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGA1P17096 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGA1P17096 ARAFP2-201ENST00000440565 559 ntBASIC4.35□□□□□ -1.71
HMGA1P17096 ARL4AP3-201ENST00000441452 574 ntBASIC4.35□□□□□ -1.71
HMGA1P17096 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGA1P17096 AC108145.1-201ENST00000503770 153 ntBASIC4.35□□□□□ -1.71
HMGA1P17096 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGA1P17096 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.35□□□□□ -1.71
HMGA1P17096 RPL21P7-201ENST00000557463 483 ntBASIC4.35□□□□□ -1.71
HMGA1P17096 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.35□□□□□ -1.71
HMGA1P17096 AC027176.2-201ENST00000559166 746 ntBASIC4.35□□□□□ -1.71
HMGA1P17096 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.35□□□□□ -1.71
HMGA1P17096 MIR1254-2-201ENST00000579553 63 ntBASIC4.35□□□□□ -1.71
HMGA1P17096 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.35□□□□□ -1.71
HMGA1P17096 AL138721.1-201ENST00000616756 179 ntBASIC4.35□□□□□ -1.71
HMGA1P17096 MIR6875-201ENST00000617506 72 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms