Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 AL049830.4-201ENST00000555149 351 ntBASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 RN7SL802P-201ENST00000577858 299 ntBASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 MIR5699-201ENST00000578903 90 ntBASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SNX9Q9Y5X1 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AL034370.1-201ENST00000397254 1590 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AC010132.2-201ENST00000295493 1043 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 MIR1271-201ENST00000408537 86 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 RN7SKP247-201ENST00000411094 308 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AL645608.4-201ENST00000423619 154 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AC007563.3-201ENST00000433233 371 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AL451139.1-201ENST00000434718 346 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AC006326.1-201ENST00000445465 787 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AL035551.1-201ENST00000446931 348 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 GYG1P1-201ENST00000460864 698 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 HMGB1P3-201ENST00000502802 616 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AC091868.1-201ENST00000508746 304 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 OSBPL9P3-201ENST00000534523 595 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AC093249.4-201ENST00000564755 259 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AC087283.1-201ENST00000604029 1074 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AC073342.3-201ENST00000624211 193 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AL645568.2-201ENST00000432815 1337 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AP000542.2-201ENST00000623199 6179 ntBASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.14□□□□□ -1.59
SNX9Q9Y5X1 AC120338.1-201ENST00000625074 1541 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AC107027.3-201ENST00000565095 3473 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 SMG1P6-201ENST00000532337 2930 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AC005332.5-201ENST00000591222 2919 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 RPL37P18-201ENST00000411602 243 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 BX510359.2-201ENST00000417920 305 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AL358176.3-201ENST00000420757 454 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AC005154.2-201ENST00000438110 379 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AL157884.3-201ENST00000448273 1184 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 RPS6P2-201ENST00000454208 705 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AC037198.2-201ENST00000478845 733 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 TRAV31-201ENST00000502780 342 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 SCARNA22-201ENST00000503991 125 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AC073358.1-201ENST00000505671 684 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 MTCO3P27-201ENST00000514397 196 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 ENPP7P9-201ENST00000514456 627 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 HMGB1P19-201ENST00000517578 577 ntBASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.13□□□□□ -1.59
SNX9Q9Y5X1 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms