Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL20A1Q9P218 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL20A1Q9P218 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL20A1Q9P218 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
COL20A1Q9P218 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 U3.23-201ENST00000391132 200 ntBASIC5.65□□□□□ -1.5
COL20A1Q9P218 AL021331.1-201ENST00000402817 582 ntBASIC5.65□□□□□ -1.5
COL20A1Q9P218 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.65□□□□□ -1.5
COL20A1Q9P218 CETN4P-201ENST00000432407 469 ntBASIC5.65□□□□□ -1.5
COL20A1Q9P218 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 H2AFZP6-201ENST00000444403 394 ntBASIC5.65□□□□□ -1.5
COL20A1Q9P218 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 AC008897.1-201ENST00000494006 347 ntBASIC5.65□□□□□ -1.5
COL20A1Q9P218 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL20A1Q9P218 AC002487.1-201ENST00000604565 994 ntBASIC5.65□□□□□ -1.5
COL20A1Q9P218 AC024595.1-201ENST00000623088 387 ntBASIC5.65□□□□□ -1.5
COL20A1Q9P218 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.65□□□□□ -1.5
COL20A1Q9P218 LINC01808-202ENST00000641680 1116 ntBASIC5.65□□□□□ -1.5
COL20A1Q9P218 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL20A1Q9P218 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.65□□□□□ -1.51
COL20A1Q9P218 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
COL20A1Q9P218 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL20A1Q9P218 ZNF652P1-201ENST00000442420 1309 ntBASIC5.65□□□□□ -1.51
COL20A1Q9P218 AL355578.1-201ENST00000607405 1328 ntBASIC5.65□□□□□ -1.51
COL20A1Q9P218 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL20A1Q9P218 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL20A1Q9P218 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL20A1Q9P218 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL20A1Q9P218 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL20A1Q9P218 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL20A1Q9P218 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COL20A1Q9P218 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.64□□□□□ -1.51
COL20A1Q9P218 ECM1P2-201ENST00000503354 1577 ntBASIC5.64□□□□□ -1.51
COL20A1Q9P218 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
COL20A1Q9P218 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL20A1Q9P218 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
COL20A1Q9P218 RNU6-549P-201ENST00000384433 107 ntBASIC5.64□□□□□ -1.51
COL20A1Q9P218 AL445213.1-201ENST00000412589 747 ntBASIC5.64□□□□□ -1.51
COL20A1Q9P218 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.64□□□□□ -1.51
COL20A1Q9P218 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.64□□□□□ -1.51
COL20A1Q9P218 RPS27AP6-201ENST00000427962 448 ntBASIC5.64□□□□□ -1.51
COL20A1Q9P218 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.64□□□□□ -1.51
COL20A1Q9P218 Z73417.1-201ENST00000447373 778 ntBASIC5.64□□□□□ -1.51
COL20A1Q9P218 ZNF886P-201ENST00000450781 723 ntBASIC5.64□□□□□ -1.51
COL20A1Q9P218 AC010733.1-201ENST00000451515 401 ntBASIC5.64□□□□□ -1.51
COL20A1Q9P218 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.64□□□□□ -1.51
COL20A1Q9P218 NIFKP7-201ENST00000503365 834 ntBASIC5.64□□□□□ -1.51
COL20A1Q9P218 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.64□□□□□ -1.51
COL20A1Q9P218 MTND2P38-201ENST00000522536 667 ntBASIC5.64□□□□□ -1.51
COL20A1Q9P218 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.64□□□□□ -1.51
COL20A1Q9P218 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.64□□□□□ -1.51
COL20A1Q9P218 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.64□□□□□ -1.51
COL20A1Q9P218 MIR3667-201ENST00000581025 74 ntBASIC5.64□□□□□ -1.51
COL20A1Q9P218 PRPF19P1-201ENST00000584766 898 ntBASIC5.64□□□□□ -1.51
COL20A1Q9P218 AC104785.1-201ENST00000603220 588 ntBASIC5.64□□□□□ -1.51
COL20A1Q9P218 AC113368.1-201ENST00000603736 382 ntBASIC5.64□□□□□ -1.51
COL20A1Q9P218 RNA5SP439-201ENST00000617595 124 ntBASIC5.64□□□□□ -1.51
COL20A1Q9P218 AC123767.1-202ENST00000620407 817 ntBASIC5.64□□□□□ -1.51
COL20A1Q9P218 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.64□□□□□ -1.51
COL20A1Q9P218 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL20A1Q9P218 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL20A1Q9P218 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL20A1Q9P218 AC109446.4-201ENST00000623235 2755 ntBASIC5.64□□□□□ -1.51
COL20A1Q9P218 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
COL20A1Q9P218 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
COL20A1Q9P218 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.64□□□□□ -1.51
COL20A1Q9P218 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL20A1Q9P218 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL20A1Q9P218 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL20A1Q9P218 AC004817.4-201ENST00000602396 3625 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL20A1Q9P218 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL20A1Q9P218 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL20A1Q9P218 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL20A1Q9P218 AL121839.2-201ENST00000565058 6943 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
COL20A1Q9P218 ENSAP3-201ENST00000312710 333 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
COL20A1Q9P218 RN7SKP74-201ENST00000362849 309 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.63□□□□□ -1.51
COL20A1Q9P218 RNU6-224P-201ENST00000384055 107 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 AL357515.1-201ENST00000402967 542 ntBASIC5.63□□□□□ -1.51
COL20A1Q9P218 RN7SKP100-201ENST00000411258 284 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms