Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 NDUFB4P12-201ENST00000513465 390 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 OR8Q1P-201ENST00000526467 655 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 OR5AM1P-201ENST00000532136 1032 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 MTCYBP22-201ENST00000603788 447 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 DUXAP11-201ENST00000603858 526 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AL592221.1-201ENST00000605266 382 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AC016877.3-201ENST00000606778 504 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AL138478.1-201ENST00000612252 832 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AC072046.2-201ENST00000618366 268 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AL356121.2-201ENST00000624715 780 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 FP325313.1-201ENST00000638228 703 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 AC006042.3-201ENST00000454684 1469 ntBASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CDK5RAP1Q96SZ6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC092111.2-201ENST00000611627 1414 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 RN7SKP162-201ENST00000363605 345 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 Y_RNA.813-201ENST00000364639 102 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 CCDC58P2-201ENST00000417131 366 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AL590399.2-201ENST00000427536 309 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 MTND1P32-201ENST00000433043 938 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC105399.1-202ENST00000447303 205 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 TPT1P14-201ENST00000448018 505 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AURKAPS1-201ENST00000451805 1212 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 Z95152.1-201ENST00000453556 656 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 RANP1-206ENST00000455094 651 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 HMGB1P3-201ENST00000502802 616 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC093770.1-201ENST00000511559 571 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC090022.1-201ENST00000546569 311 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 NMNAT1P5-201ENST00000559657 841 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 SUMO2P15-201ENST00000604285 278 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC112230.1-201ENST00000604342 547 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC006270.3-201ENST00000605967 1036 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 RNU4-89P-201ENST00000607443 133 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC009509.4-201ENST00000619202 509 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AL360270.2-201ENST00000562952 5985 ntBASIC5.76□□□□□ -1.49
CDK5RAP1Q96SZ6 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CDK5RAP1Q96SZ6 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms