Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RPL7P31-201ENST00000450192 724 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AC092647.2-201ENST00000452998 253 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AC093270.2-201ENST00000486157 792 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AC108157.1-201ENST00000510511 539 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 RNU1-6P-201ENST00000516290 144 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AC090151.1-201ENST00000520784 730 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 NOP56P3-201ENST00000549457 385 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AC093249.4-201ENST00000564755 259 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 MTND6P33-201ENST00000571794 183 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AC209154.1-201ENST00000582156 337 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AP004372.1-201ENST00000604842 844 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 OR7A19P-201ENST00000608051 733 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 CR589904.2-201ENST00000612533 440 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AL121873.1-201ENST00000616013 524 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AP002505.2-201ENST00000623585 696 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 AC009452.1-201ENST00000640823 606 ntBASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
CCDC71LQ8N9Z2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC093311.1-201ENST00000506586 2021 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC107977.1-201ENST00000355745 939 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 RNA5SP428-201ENST00000365129 132 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 RN7SKP59-201ENST00000410520 314 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC114755.2-201ENST00000413520 361 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC019070.1-201ENST00000415008 1024 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 OR2X1P-201ENST00000421144 687 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 RPL21P43-201ENST00000425440 472 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 CENPIP1-201ENST00000425713 902 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 DYNLL1P7-201ENST00000429273 258 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 RPL34P20-201ENST00000442771 351 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 METTL15P1-201ENST00000481421 1045 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 SNORD116-26-201ENST00000516006 96 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 NPM1P47-201ENST00000560843 856 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC011447.4-201ENST00000587562 111 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC008521.2-201ENST00000591021 259 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 MTCO3P22-201ENST00000603219 784 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AL359513.1-201ENST00000614364 557 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC126175.1-201ENST00000617041 758 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AL669942.2-201ENST00000620352 697 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC073592.7-201ENST00000623659 507 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC020923.1-201ENST00000624021 917 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC119674.1-212ENST00000641155 993 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC017002.4-201ENST00000604721 1525 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC007529.1-201ENST00000418574 2178 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 AC099654.2-201ENST00000433031 1980 ntBASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCDC71LQ8N9Z2 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 AL031119.1-201ENST00000404707 1879 ntBASIC3.88□□□□□ -1.79
CCDC71LQ8N9Z2 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms