Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 MTCO1P18-201ENST00000455518 1419 ntBASIC5.21□□□□□ -1.58
RFX6Q8HWS3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
RFX6Q8HWS3 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 RNU6-236P-201ENST00000363886 106 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 RNA5SP435-201ENST00000364044 108 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 MIR513B-201ENST00000385136 84 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 RNU6-932P-201ENST00000391108 106 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 LRRC37BP1-201ENST00000398851 714 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AL391361.1-201ENST00000405580 489 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 HMGB1P13-201ENST00000406019 642 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 MIR1286-201ENST00000408112 78 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AL590806.1-201ENST00000415818 853 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC023128.2-201ENST00000420880 1223 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 NANOGP4-201ENST00000427230 913 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 GTF2IP3-201ENST00000433887 494 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AL450023.3-201ENST00000440592 271 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC012512.1-201ENST00000446594 718 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 SEPT14P24-201ENST00000447236 180 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 TRY2P-201ENST00000448860 689 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC092647.2-201ENST00000452998 253 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 HMGB1P4-201ENST00000455362 567 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC117394.1-201ENST00000477323 567 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC004825.1-201ENST00000555068 586 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 OR11J2P-201ENST00000555298 907 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC116553.2-201ENST00000564203 463 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 MIR4310-201ENST00000582950 57 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC023813.4-201ENST00000607580 580 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC231759.1-201ENST00000616455 597 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC022079.1-201ENST00000621546 602 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC010435.1-201ENST00000623353 1177 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 AC139713.2-210ENST00000641741 992 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 CIR1P2-201ENST00000514821 1342 ntBASIC5.2□□□□□ -1.58
RFX6Q8HWS3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.2□□□□□ -1.58
RFX6Q8HWS3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.19□□□□□ -1.58
RFX6Q8HWS3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
RFX6Q8HWS3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.19□□□□□ -1.58
RFX6Q8HWS3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFX6Q8HWS3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFX6Q8HWS3 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RFX6Q8HWS3 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFX6Q8HWS3 SNORA66-201ENST00000384792 133 ntBASIC5.19□□□□□ -1.58
RFX6Q8HWS3 MT-TP-201ENST00000387461 68 ntBASIC5.19□□□□□ -1.58
RFX6Q8HWS3 MTND4P13-201ENST00000402078 1023 ntBASIC5.19□□□□□ -1.58
RFX6Q8HWS3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.19□□□□□ -1.58
RFX6Q8HWS3 RN7SKP206-201ENST00000410823 293 ntBASIC5.19□□□□□ -1.58
RFX6Q8HWS3 CTSL3P-202ENST00000412179 788 ntBASIC5.19□□□□□ -1.58
RFX6Q8HWS3 AC010385.1-201ENST00000412374 256 ntBASIC5.19□□□□□ -1.58
RFX6Q8HWS3 AC107081.1-201ENST00000414975 361 ntBASIC5.19□□□□□ -1.58
RFX6Q8HWS3 MTND4P3-201ENST00000417829 541 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms