Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AL121839.1-201ENST00000556233 1185 ntBASIC4.37□□□□□ -1.71
RAB43Q86YS6 AC136624.4-201ENST00000573044 370 ntBASIC4.37□□□□□ -1.71
RAB43Q86YS6 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.37□□□□□ -1.71
RAB43Q86YS6 AC124856.1-201ENST00000600819 896 ntBASIC4.37□□□□□ -1.71
RAB43Q86YS6 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.37□□□□□ -1.71
RAB43Q86YS6 LINC00901.1-201ENST00000617252 152 ntBASIC4.37□□□□□ -1.71
RAB43Q86YS6 AL669942.2-201ENST00000620352 697 ntBASIC4.37□□□□□ -1.71
RAB43Q86YS6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.37□□□□□ -1.71
RAB43Q86YS6 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.37□□□□□ -1.71
RAB43Q86YS6 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RAB43Q86YS6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RAB43Q86YS6 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.37□□□□□ -1.71
RAB43Q86YS6 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RAB43Q86YS6 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAB43Q86YS6 EOGT-210ENST00000615922 1931 ntBASIC4.36□□□□□ -1.71
RAB43Q86YS6 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
RAB43Q86YS6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RAB43Q86YS6 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAB43Q86YS6 AC126755.2-208ENST00000327792 462 ntBASIC4.36□□□□□ -1.71
RAB43Q86YS6 AC138969.1-213ENST00000331436 462 ntBASIC4.36□□□□□ -1.71
RAB43Q86YS6 RNU6-1331P-201ENST00000363658 106 ntBASIC4.36□□□□□ -1.71
RAB43Q86YS6 RN7SKP224-201ENST00000364140 325 ntBASIC4.36□□□□□ -1.71
RAB43Q86YS6 AL590762.2-201ENST00000395798 571 ntBASIC4.36□□□□□ -1.71
RAB43Q86YS6 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.36□□□□□ -1.71
RAB43Q86YS6 AC098592.2-201ENST00000413158 265 ntBASIC4.36□□□□□ -1.71
RAB43Q86YS6 SERPINA7P1-201ENST00000443077 631 ntBASIC4.36□□□□□ -1.71
RAB43Q86YS6 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.36□□□□□ -1.71
RAB43Q86YS6 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.36□□□□□ -1.71
RAB43Q86YS6 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.36□□□□□ -1.71
RAB43Q86YS6 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.36□□□□□ -1.71
RAB43Q86YS6 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAB43Q86YS6 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.36□□□□□ -1.71
RAB43Q86YS6 DYNLL1P4-201ENST00000549314 266 ntBASIC4.36□□□□□ -1.71
RAB43Q86YS6 DUX4L52-201ENST00000549363 777 ntBASIC4.36□□□□□ -1.71
RAB43Q86YS6 SLC25A36P1-201ENST00000590111 465 ntBASIC4.36□□□□□ -1.71
RAB43Q86YS6 AC073091.2-201ENST00000603205 907 ntBASIC4.36□□□□□ -1.71
RAB43Q86YS6 AC008782.1-201ENST00000603386 430 ntBASIC4.36□□□□□ -1.71
RAB43Q86YS6 AC009704.2-201ENST00000618739 483 ntBASIC4.36□□□□□ -1.71
RAB43Q86YS6 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.36□□□□□ -1.71
RAB43Q86YS6 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
RAB43Q86YS6 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.36□□□□□ -1.71
RAB43Q86YS6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
RAB43Q86YS6 VN2R3P-201ENST00000422626 1412 ntBASIC4.36□□□□□ -1.71
RAB43Q86YS6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RAB43Q86YS6 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RAB43Q86YS6 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.36□□□□□ -1.71
RAB43Q86YS6 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.35□□□□□ -1.71
RAB43Q86YS6 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.35□□□□□ -1.71
RAB43Q86YS6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.35□□□□□ -1.71
RAB43Q86YS6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAB43Q86YS6 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAB43Q86YS6 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.35□□□□□ -1.71
RAB43Q86YS6 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.35□□□□□ -1.71
RAB43Q86YS6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAB43Q86YS6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAB43Q86YS6 DDX18P3-201ENST00000404856 2007 ntBASIC4.35□□□□□ -1.71
RAB43Q86YS6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAB43Q86YS6 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.35□□□□□ -1.71
RAB43Q86YS6 OR1F12-201ENST00000402365 945 ntBASIC4.35□□□□□ -1.71
RAB43Q86YS6 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAB43Q86YS6 AL356967.1-201ENST00000406305 431 ntBASIC4.35□□□□□ -1.71
RAB43Q86YS6 VDAC1P9-201ENST00000412766 841 ntBASIC4.35□□□□□ -1.71
RAB43Q86YS6 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAB43Q86YS6 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.35□□□□□ -1.71
RAB43Q86YS6 AC106901.1-201ENST00000425086 698 ntBASIC4.35□□□□□ -1.71
RAB43Q86YS6 RPEP3-201ENST00000425462 676 ntBASIC4.35□□□□□ -1.71
RAB43Q86YS6 AC098799.3-201ENST00000506095 438 ntBASIC4.35□□□□□ -1.71
RAB43Q86YS6 HMGB3P13-201ENST00000511263 607 ntBASIC4.35□□□□□ -1.71
RAB43Q86YS6 AP001804.2-201ENST00000533932 910 ntBASIC4.35□□□□□ -1.71
RAB43Q86YS6 CYCSP28-201ENST00000534284 321 ntBASIC4.35□□□□□ -1.71
RAB43Q86YS6 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAB43Q86YS6 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
RAB43Q86YS6 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.35□□□□□ -1.71
RAB43Q86YS6 AC084783.1-201ENST00000565846 910 ntBASIC4.35□□□□□ -1.71
RAB43Q86YS6 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.35□□□□□ -1.71
RAB43Q86YS6 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.35□□□□□ -1.71
RAB43Q86YS6 AL445423.1-201ENST00000609941 536 ntBASIC4.35□□□□□ -1.71
RAB43Q86YS6 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RAB43Q86YS6 AL121873.1-201ENST00000616013 524 ntBASIC4.35□□□□□ -1.71
RAB43Q86YS6 AL158062.1-201ENST00000619632 745 ntBASIC4.35□□□□□ -1.71
RAB43Q86YS6 AC016717.3-201ENST00000624730 554 ntBASIC4.35□□□□□ -1.71
RAB43Q86YS6 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RAB43Q86YS6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RAB43Q86YS6 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.35□□□□□ -1.71
RAB43Q86YS6 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RAB43Q86YS6 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RAB43Q86YS6 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RAB43Q86YS6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAB43Q86YS6 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAB43Q86YS6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAB43Q86YS6 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RAB43Q86YS6 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RAB43Q86YS6 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 RNU6-729P-201ENST00000384399 107 ntBASIC4.34□□□□□ -1.71
RAB43Q86YS6 U3.22-201ENST00000391120 215 ntBASIC4.34□□□□□ -1.71
RAB43Q86YS6 SDHCP2-201ENST00000398565 501 ntBASIC4.34□□□□□ -1.71
RAB43Q86YS6 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.34□□□□□ -1.71
RAB43Q86YS6 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms