Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 ARPC3P1-201ENST00000437218 533 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 AL353093.1-201ENST00000441292 436 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.48□□□□□ -1.37
SOX4Q06945 AC023274.2-201ENST00000445264 521 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.48□□□□□ -1.37
SOX4Q06945 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX4Q06945 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX4Q06945 AC019235.1-201ENST00000503847 207 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.48□□□□□ -1.37
SOX4Q06945 MTCO3P9-201ENST00000506989 781 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 BTG4P1-201ENST00000510421 183 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 IMPA1P1-201ENST00000510718 842 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 RNU6-1334P-201ENST00000516032 105 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC6.48□□□□□ -1.37
SOX4Q06945 AP002748.2-201ENST00000528671 348 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX4Q06945 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC6.48□□□□□ -1.37
SOX4Q06945 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX4Q06945 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.48□□□□□ -1.37
SOX4Q06945 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX4Q06945 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.48□□□□□ -1.37
SOX4Q06945 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.48□□□□□ -1.37
SOX4Q06945 AC060780.3-201ENST00000589464 80 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 AC008521.2-201ENST00000591021 259 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.48□□□□□ -1.37
SOX4Q06945 AC012254.3-201ENST00000591183 2117 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.48□□□□□ -1.37
SOX4Q06945 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX4Q06945 RPL12P48-201ENST00000605620 304 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX4Q06945 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 AL139089.1-201ENST00000620372 975 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 AL359880.1-201ENST00000621879 266 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 AC116667.2-201ENST00000641075 823 ntBASIC6.48□□□□□ -1.37
SOX4Q06945 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC6.48□□□□□ -1.37
SOX4Q06945 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX4Q06945 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX4Q06945 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SOX4Q06945 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
SOX4Q06945 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.48□□□□□ -1.37
SOX4Q06945 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SOX4Q06945 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SOX4Q06945 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
SOX4Q06945 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.48□□□□□ -1.37
SOX4Q06945 ZNF101P1-201ENST00000435701 1720 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX4Q06945 BX284613.1-201ENST00000452221 1641 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX4Q06945 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SOX4Q06945 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX4Q06945 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX4Q06945 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX4Q06945 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX4Q06945 OR52B3P-201ENST00000314715 928 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX4Q06945 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SOX4Q06945 OR10R3P-201ENST00000361688 942 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 RNU4-73P-201ENST00000363164 141 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 RNU5D-1-201ENST00000363299 116 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 Y_RNA.296-201ENST00000364930 108 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
SOX4Q06945 FAT1P1-201ENST00000406588 507 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 AC092745.2-202ENST00000411880 369 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX4Q06945 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.47□□□□□ -1.37
SOX4Q06945 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX4Q06945 BTF3L4P3-201ENST00000418879 476 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC6.47□□□□□ -1.37
SOX4Q06945 NMD3P2-201ENST00000421815 761 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 AC245884.2-201ENST00000426257 404 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 TIMM9P3-201ENST00000428659 274 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.47□□□□□ -1.37
SOX4Q06945 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.47□□□□□ -1.37
SOX4Q06945 AC104850.1-201ENST00000435940 476 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 AC015983.1-201ENST00000441577 373 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 BMS1P10-201ENST00000443754 1120 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.47□□□□□ -1.37
SOX4Q06945 RPL39P6-201ENST00000448289 150 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 COX6CP18-201ENST00000448769 222 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 RPL23AP60-201ENST00000450011 454 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6.47□□□□□ -1.37
SOX4Q06945 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.47□□□□□ -1.37
SOX4Q06945 SNRPFP4-201ENST00000456366 242 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 ACA64.1-201ENST00000459171 127 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 AC011476.1-201ENST00000466725 307 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 OR52A4P-201ENST00000472867 958 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 AC108078.1-201ENST00000508073 725 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 AC009646.1-201ENST00000510455 318 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX4Q06945 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX4Q06945 AC087276.1-201ENST00000529659 480 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.47□□□□□ -1.37
SOX4Q06945 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX4Q06945 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX4Q06945 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC6.47□□□□□ -1.37
SOX4Q06945 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX4Q06945 AP001004.1-201ENST00000582468 324 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 AC119403.2-201ENST00000590960 598 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX4Q06945 AC125494.2-201ENST00000602431 657 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms