Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.13□□□□□ -1.59
MTHFRP42898 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.13□□□□□ -1.59
MTHFRP42898 AC040958.1-201ENST00000561102 201 ntBASIC5.13□□□□□ -1.59
MTHFRP42898 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.13□□□□□ -1.59
MTHFRP42898 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.13□□□□□ -1.59
MTHFRP42898 MTCO3P22-201ENST00000603219 784 ntBASIC5.13□□□□□ -1.59
MTHFRP42898 AC011453.2-201ENST00000603737 729 ntBASIC5.13□□□□□ -1.59
MTHFRP42898 AC242628.1-201ENST00000606810 391 ntBASIC5.13□□□□□ -1.59
MTHFRP42898 AC007497.1-201ENST00000610421 561 ntBASIC5.13□□□□□ -1.59
MTHFRP42898 FAM27B-201ENST00000610601 213 ntBASIC5.13□□□□□ -1.59
MTHFRP42898 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.13□□□□□ -1.59
MTHFRP42898 MIR6839-201ENST00000620425 113 ntBASIC5.13□□□□□ -1.59
MTHFRP42898 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.13□□□□□ -1.59
MTHFRP42898 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.13□□□□□ -1.59
MTHFRP42898 AC108751.5-201ENST00000492880 1336 ntBASIC5.13□□□□□ -1.59
MTHFRP42898 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
MTHFRP42898 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.13□□□□□ -1.59
MTHFRP42898 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.13□□□□□ -1.59
MTHFRP42898 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
MTHFRP42898 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.13□□□□□ -1.59
MTHFRP42898 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
MTHFRP42898 AP000756.2-201ENST00000624168 2567 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 AL137100.1-201ENST00000556703 1620 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
MTHFRP42898 AC000123.3-201ENST00000624029 4975 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
MTHFRP42898 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.12□□□□□ -1.59
MTHFRP42898 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MTHFRP42898 AC090017.1-201ENST00000548612 1779 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.12□□□□□ -1.59
MTHFRP42898 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
MTHFRP42898 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
MTHFRP42898 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
MTHFRP42898 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MTHFRP42898 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
MTHFRP42898 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
MTHFRP42898 RN7SKP27-201ENST00000410684 333 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.12□□□□□ -1.59
MTHFRP42898 RPL12P9-201ENST00000412942 488 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.12□□□□□ -1.59
MTHFRP42898 AC234779.1-201ENST00000425910 285 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 AC004975.1-201ENST00000428733 208 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 ZNF965P-201ENST00000432501 817 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 TXNP5-201ENST00000441043 315 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 AL357520.1-201ENST00000441557 453 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.12□□□□□ -1.59
MTHFRP42898 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.12□□□□□ -1.59
MTHFRP42898 CLIC4P1-201ENST00000453177 535 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 MTND2P30-201ENST00000456663 382 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.12□□□□□ -1.59
MTHFRP42898 APOOP2-201ENST00000461561 539 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 AC021660.1-201ENST00000465006 554 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 SCARNA22-201ENST00000503991 125 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 AC025768.1-201ENST00000510057 267 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 RN7SKP21-201ENST00000516503 220 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.12□□□□□ -1.59
MTHFRP42898 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.12□□□□□ -1.59
MTHFRP42898 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.12□□□□□ -1.59
MTHFRP42898 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.12□□□□□ -1.59
MTHFRP42898 OR5M2P-201ENST00000529003 936 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.12□□□□□ -1.59
MTHFRP42898 AC027369.5-201ENST00000533838 755 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 LSM3P2-201ENST00000551246 273 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.12□□□□□ -1.59
MTHFRP42898 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.12□□□□□ -1.59
MTHFRP42898 AC090312.1-201ENST00000580637 348 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 AC005191.1-201ENST00000603950 358 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.12□□□□□ -1.59
MTHFRP42898 AC245389.2-201ENST00000616023 576 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 AC025016.1-201ENST00000616746 682 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 AC242843.1-201ENST00000618702 573 ntBASIC5.12□□□□□ -1.59
MTHFRP42898 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.12□□□□□ -1.59
MTHFRP42898 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
MTHFRP42898 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MTHFRP42898 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MTHFRP42898 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
MTHFRP42898 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
MTHFRP42898 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
MTHFRP42898 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
MTHFRP42898 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
MTHFRP42898 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.11□□□□□ -1.59
MTHFRP42898 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
MTHFRP42898 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.11□□□□□ -1.59
MTHFRP42898 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
MTHFRP42898 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
MTHFRP42898 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
MTHFRP42898 FAM3C2-201ENST00000312214 681 ntBASIC5.11□□□□□ -1.59
MTHFRP42898 Y_RNA.110-201ENST00000363220 99 ntBASIC5.11□□□□□ -1.59
MTHFRP42898 RNA5SP479-201ENST00000364858 117 ntBASIC5.11□□□□□ -1.59
MTHFRP42898 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.11□□□□□ -1.59
MTHFRP42898 RNU6-31P-201ENST00000384388 108 ntBASIC5.11□□□□□ -1.59
MTHFRP42898 MIR1193-201ENST00000408109 78 ntBASIC5.11□□□□□ -1.59
MTHFRP42898 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.11□□□□□ -1.59
MTHFRP42898 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.11□□□□□ -1.59
MTHFRP42898 AL592293.2-201ENST00000422292 996 ntBASIC5.11□□□□□ -1.59
MTHFRP42898 AC099336.2-201ENST00000422457 254 ntBASIC5.11□□□□□ -1.59
MTHFRP42898 AC012519.1-201ENST00000424588 610 ntBASIC5.11□□□□□ -1.59
MTHFRP42898 RPS26P47-201ENST00000427219 348 ntBASIC5.11□□□□□ -1.59
MTHFRP42898 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.11□□□□□ -1.59
MTHFRP42898 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms