Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 RNA5SP340-201ENST00000517132 107 ntBASIC7.49□□□□□ -1.21
ALDH1A1P00352 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC7.49□□□□□ -1.21
ALDH1A1P00352 AP003467.2-201ENST00000520175 319 ntBASIC7.49□□□□□ -1.21
ALDH1A1P00352 AC023050.3-201ENST00000541142 333 ntBASIC7.49□□□□□ -1.21
ALDH1A1P00352 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.49□□□□□ -1.21
ALDH1A1P00352 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.49□□□□□ -1.21
ALDH1A1P00352 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.49□□□□□ -1.21
ALDH1A1P00352 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC7.49□□□□□ -1.21
ALDH1A1P00352 OR7E18P-201ENST00000592589 702 ntBASIC7.49□□□□□ -1.21
ALDH1A1P00352 AC115286.1-201ENST00000604298 434 ntBASIC7.49□□□□□ -1.21
ALDH1A1P00352 AC112187.2-201ENST00000604345 283 ntBASIC7.49□□□□□ -1.21
ALDH1A1P00352 AP004607.9-201ENST00000618202 316 ntBASIC7.49□□□□□ -1.21
ALDH1A1P00352 MTND4LP32-201ENST00000636111 270 ntBASIC7.49□□□□□ -1.21
ALDH1A1P00352 ATM-228ENST00000639240 498 ntTSL 5 BASIC7.49□□□□□ -1.21
ALDH1A1P00352 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
ALDH1A1P00352 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
ALDH1A1P00352 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ALDH1A1P00352 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC7.49□□□□□ -1.21
ALDH1A1P00352 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ALDH1A1P00352 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ALDH1A1P00352 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ALDH1A1P00352 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ALDH1A1P00352 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ALDH1A1P00352 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
ALDH1A1P00352 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
ALDH1A1P00352 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.49□□□□□ -1.21
ALDH1A1P00352 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
ALDH1A1P00352 RACGAP1P-201ENST00000550663 1879 ntBASIC7.49□□□□□ -1.21
ALDH1A1P00352 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC7.49□□□□□ -1.21
ALDH1A1P00352 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC7.49□□□□□ -1.21
ALDH1A1P00352 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ALDH1A1P00352 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ALDH1A1P00352 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
ALDH1A1P00352 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC7.49□□□□□ -1.21
ALDH1A1P00352 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.49□□□□□ -1.21
ALDH1A1P00352 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 IQCA1-206ENST00000431676 3069 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
ALDH1A1P00352 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ALDH1A1P00352 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 ADAM2-201ENST00000265708 2672 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
ALDH1A1P00352 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
ALDH1A1P00352 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ALDH1A1P00352 ZNF812P-201ENST00000457674 1694 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 AL023806.3-201ENST00000638502 2704 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ALDH1A1P00352 AC010132.2-201ENST00000295493 1043 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 RNA5SP477-201ENST00000362639 119 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 RNA5SP65-201ENST00000363166 119 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
ALDH1A1P00352 RNU6-1222P-201ENST00000384615 107 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 MIR217-201ENST00000384817 110 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 MIR525-201ENST00000384978 85 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 U3.25-201ENST00000391209 220 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 MIR548F4-201ENST00000408515 105 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 Y_RNA.608-201ENST00000410647 95 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 SNRPFP1-201ENST00000414761 252 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 AL645937.1-202ENST00000421799 937 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 AC005033.1-201ENST00000428904 813 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 RPL36AP53-201ENST00000432891 316 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 SBDSP1-204ENST00000453858 737 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 U8.20-201ENST00000459445 131 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 AC083798.1-201ENST00000472671 131 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 RN7SL284P-201ENST00000498823 275 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 TBCA-209ENST00000522370 435 ntTSL 3 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 RGS5-218ENST00000526176 574 ntTSL 4 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 ARL6IP1P1-201ENST00000545836 610 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 AL049870.4-201ENST00000555741 486 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 ZNF322P1-201ENST00000568013 1209 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 AL352984.2-201ENST00000611153 546 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ALDH1A1P00352 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
ALDH1A1P00352 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC7.48□□□□□ -1.21
ALDH1A1P00352 NMD3P1-201ENST00000439704 1488 ntBASIC7.48□□□□□ -1.21
ALDH1A1P00352 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
ALDH1A1P00352 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms