Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC233289.1-201ENST00000403700 508 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 RNA5SP113-201ENST00000410486 84 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 CEACAMP8-201ENST00000413902 580 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC004448.2-201ENST00000422360 586 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC007559.1-201ENST00000428736 355 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 DNAJC19P7-201ENST00000428811 344 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 AL513533.1-201ENST00000453728 415 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 EIF2S2P5-201ENST00000457635 968 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 FTH1P2-201ENST00000466086 412 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC006967.1-201ENST00000467608 589 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 RN7SL354P-201ENST00000469282 294 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 NDUFA5P9-201ENST00000472609 340 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC012414.2-201ENST00000559474 187 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 AL133247.2-201ENST00000603236 482 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC096553.1-201ENST00000605169 829 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC100814.1-201ENST00000606963 623 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC091979.2-201ENST00000607514 214 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 AP001005.3-201ENST00000622049 129 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC012414.7-202ENST00000622705 1090 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 AC004232.3-201ENST00000622977 525 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 MAPK10-286ENST00000641208 8747 ntBASIC4.46□□□□□ -1.7
RNF6Q9Y252 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNF6Q9Y252 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF6Q9Y252 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNF6Q9Y252 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF6Q9Y252 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNF6Q9Y252 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
RNF6Q9Y252 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF6Q9Y252 CASC19-284ENST00000642142 1868 ntBASIC4.45□□□□□ -1.7
RNF6Q9Y252 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF6Q9Y252 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF6Q9Y252 SAMMSON-226ENST00000642089 1582 ntBASIC4.45□□□□□ -1.7
RNF6Q9Y252 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF6Q9Y252 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF6Q9Y252 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 MFSD8-216ENST00000641147 4009 ntBASIC4.45□□□□□ -1.7
RNF6Q9Y252 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF6Q9Y252 RNA5SP191-201ENST00000362585 102 ntBASIC4.45□□□□□ -1.7
RNF6Q9Y252 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RNF6Q9Y252 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RNF6Q9Y252 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 HDGFP1-201ENST00000405943 252 ntBASIC4.45□□□□□ -1.7
RNF6Q9Y252 RN7SKP247-201ENST00000411094 308 ntBASIC4.45□□□□□ -1.7
RNF6Q9Y252 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 C4BPAP2-201ENST00000428434 478 ntBASIC4.45□□□□□ -1.7
RNF6Q9Y252 TRIM60P13-201ENST00000432350 1283 ntBASIC4.45□□□□□ -1.7
RNF6Q9Y252 AC245517.2-201ENST00000442890 346 ntBASIC4.45□□□□□ -1.7
RNF6Q9Y252 TCEA1P1-201ENST00000449716 880 ntBASIC4.45□□□□□ -1.7
RNF6Q9Y252 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 RNU6-889P-201ENST00000517189 103 ntBASIC4.45□□□□□ -1.7
RNF6Q9Y252 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RNF6Q9Y252 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 AC209154.1-201ENST00000582156 337 ntBASIC4.45□□□□□ -1.7
RNF6Q9Y252 AC068790.4-201ENST00000602474 263 ntBASIC4.45□□□□□ -1.7
RNF6Q9Y252 AP004372.1-201ENST00000604842 844 ntBASIC4.45□□□□□ -1.7
RNF6Q9Y252 AL391358.1-201ENST00000605342 190 ntBASIC4.45□□□□□ -1.7
RNF6Q9Y252 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RNF6Q9Y252 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 AC099654.2-201ENST00000433031 1980 ntBASIC4.45□□□□□ -1.7
RNF6Q9Y252 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF6Q9Y252 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF6Q9Y252 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF6Q9Y252 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RNF6Q9Y252 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms