Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 AC010900.2-201ENST00000604508 210 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 IGKV2OR2-7-201ENST00000604652 304 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 AL022345.1-201ENST00000607292 135 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 AL591167.1-201ENST00000607321 456 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 AC010999.1-201ENST00000611856 324 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 5S_rRNA.23-201ENST00000612086 102 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 AC015819.1-201ENST00000613588 663 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 AC244100.4-201ENST00000617747 388 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 AC241377.1-201ENST00000619797 406 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 CR392039.4-201ENST00000624968 501 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 IPO5-229ENST00000631030 192 ntTSL 5 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 F13A1-201ENST00000264870 3999 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 AC018688.1-201ENST00000636528 1754 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 CA10-204ENST00000570565 2276 ntTSL 5 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 NACA-203ENST00000454682 6629 ntTSL 5 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 AC009902.3-201ENST00000606235 2172 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 AC006058.1-201ENST00000568686 5067 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 AC009166.2-201ENST00000624410 2833 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 ZNF652P1-201ENST00000442420 1309 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 DDX18P6-201ENST00000450119 1997 ntBASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.4□□□□□ -2.03
KRTAP4-3Q9BYR4 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 AC087501.5-201ENST00000607496 2374 ntBASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 MELK-208ENST00000536987 2125 ntTSL 2 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 AL162171.3-201ENST00000617439 3178 ntBASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 AC100821.1-201ENST00000523153 2479 ntBASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 RNU6-1188P-201ENST00000363795 107 ntBASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 RN7SKP171-201ENST00000364417 303 ntBASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 RNA5SP152-201ENST00000365184 110 ntBASIC2.39□□□□□ -2.03
KRTAP4-3Q9BYR4 RNU6-481P-201ENST00000384194 107 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms