Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 USP9YP4-201ENST00000424401 1745 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC7.33□□□□□ -1.24
HLA-CQ95604 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-CQ95604 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-CQ95604 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
HLA-CQ95604 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-CQ95604 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-CQ95604 CASC19-204ENST00000641001 2055 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
HLA-CQ95604 MTND4P1-201ENST00000457501 1466 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 THUMPD3P1-201ENST00000506556 1480 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 RNA5SP485-201ENST00000365053 119 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 RNU6-744P-201ENST00000365557 107 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 CASP10-206ENST00000374650 1126 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-CQ95604 RNU6-317P-201ENST00000384031 107 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 RNU6-1316P-201ENST00000384242 108 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
HLA-CQ95604 RNU6-1055P-201ENST00000391085 107 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 RPL7P60-201ENST00000397636 735 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 MIR548K-201ENST00000408406 116 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 RN7SKP279-201ENST00000411383 298 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC7.33□□□□□ -1.24
HLA-CQ95604 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC7.33□□□□□ -1.24
HLA-CQ95604 AL731534.1-201ENST00000434711 269 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC7.33□□□□□ -1.24
HLA-CQ95604 TRAPPC2P3-201ENST00000443200 321 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC7.33□□□□□ -1.24
HLA-CQ95604 AC002381.1-201ENST00000447049 280 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 AL645937.3-201ENST00000453647 936 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 RN7SL552P-201ENST00000462094 276 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 AC099340.1-201ENST00000475247 599 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC7.33□□□□□ -1.24
HLA-CQ95604 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC7.33□□□□□ -1.24
HLA-CQ95604 RNU6-976P-201ENST00000516086 111 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 SNORA74.1-201ENST00000516320 180 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 IGKV2-36-201ENST00000519999 223 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 RPL7P20-201ENST00000520308 745 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC7.33□□□□□ -1.24
HLA-CQ95604 AC023968.1-201ENST00000560719 475 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 AC008269.2-201ENST00000561915 1105 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 MYL12BP1-201ENST00000569826 507 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC7.33□□□□□ -1.24
HLA-CQ95604 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.33□□□□□ -1.24
HLA-CQ95604 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.33□□□□□ -1.24
HLA-CQ95604 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.33□□□□□ -1.24
HLA-CQ95604 BBIP1P1-201ENST00000602999 279 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.33□□□□□ -1.24
HLA-CQ95604 AL356274.1-201ENST00000617064 410 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 MIR6886-201ENST00000619864 61 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC7.33□□□□□ -1.24
HLA-CQ95604 AL359757.2-201ENST00000624309 274 ntBASIC7.33□□□□□ -1.24
HLA-CQ95604 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC7.33□□□□□ -1.24
HLA-CQ95604 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC7.33□□□□□ -1.24
HLA-CQ95604 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-CQ95604 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-CQ95604 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-CQ95604 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC7.33□□□□□ -1.24
HLA-CQ95604 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.33□□□□□ -1.24
HLA-CQ95604 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-CQ95604 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
HLA-CQ95604 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC7.33□□□□□ -1.24
HLA-CQ95604 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-CQ95604 ANKRD26P2-201ENST00000445530 1710 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-CQ95604 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC7.32□□□□□ -1.24
HLA-CQ95604 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
HLA-CQ95604 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-CQ95604 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC7.32□□□□□ -1.24
HLA-CQ95604 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
HLA-CQ95604 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
HLA-CQ95604 XPOTP1-201ENST00000443317 2398 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-CQ95604 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC7.32□□□□□ -1.24
HLA-CQ95604 AC020978.8-201ENST00000571975 3022 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-CQ95604 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC7.32□□□□□ -1.24
HLA-CQ95604 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-CQ95604 RNA5SP140-201ENST00000364524 92 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 RNU6-308P-201ENST00000390957 107 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 U3.23-201ENST00000391132 200 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 SNORA77.2-201ENST00000408571 112 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 AC074085.1-201ENST00000413598 418 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-CQ95604 CHIAP3-201ENST00000423668 1133 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC7.32□□□□□ -1.24
HLA-CQ95604 UQCRHP1-204ENST00000424609 274 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-CQ95604 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC7.32□□□□□ -1.24
HLA-CQ95604 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.32□□□□□ -1.24
HLA-CQ95604 GAPDHP20-201ENST00000444107 1007 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 RPL36AP15-201ENST00000444514 266 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.32□□□□□ -1.24
HLA-CQ95604 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.32□□□□□ -1.24
HLA-CQ95604 VN1R38P-201ENST00000450265 887 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-CQ95604 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC7.32□□□□□ -1.24
HLA-CQ95604 ELOCP24-201ENST00000456370 334 ntBASIC7.32□□□□□ -1.24
HLA-CQ95604 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HLA-CQ95604 RPS15AP1-201ENST00000457423 391 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms