Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNU6-189P-201ENST00000516120 101 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 RNU6-570P-201ENST00000517051 105 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 IGKV3D-31-201ENST00000519131 281 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 IGKV2-29-201ENST00000521304 372 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 OR52K3P-201ENST00000531655 943 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 AP001823.1-201ENST00000604056 1003 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 uc_338.21-201ENST00000622458 147 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 PTP4A1-206ENST00000627002 447 ntTSL 5 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 AC233280.20-201ENST00000637412 416 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
VARS2Q5ST30 C11orf88-203ENST00000529167 3099 ntAPPRIS ALT2 TSL 2 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
VARS2Q5ST30 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
VARS2Q5ST30 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
VARS2Q5ST30 MAPK10-354ENST00000641823 2732 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
VARS2Q5ST30 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 AC009948.3-201ENST00000603415 1798 ntBASIC7.92□□□□□ -1.14
VARS2Q5ST30 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
VARS2Q5ST30 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
VARS2Q5ST30 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VARS2Q5ST30 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VARS2Q5ST30 AC069222.1-201ENST00000608028 3360 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
VARS2Q5ST30 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VARS2Q5ST30 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VARS2Q5ST30 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
VARS2Q5ST30 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VARS2Q5ST30 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 RN7SKP250-201ENST00000363924 321 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 U3.14-201ENST00000365363 227 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VARS2Q5ST30 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 AL359633.1-201ENST00000421403 310 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 RPS3AP38-201ENST00000435889 763 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 RPL7L1P8-201ENST00000469911 741 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 AC009269.1-201ENST00000470368 833 ntTSL 3 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 AC022215.1-201ENST00000481770 362 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 AC008496.1-201ENST00000509131 295 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 HMGN1P9-201ENST00000515212 298 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 RNU7-200P-201ENST00000516105 62 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 CBX3P4-201ENST00000538909 354 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 FAM30C-201ENST00000561158 410 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 AC015720.2-201ENST00000567709 334 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
VARS2Q5ST30 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 AL161931.1-201ENST00000612768 246 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VARS2Q5ST30 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 DDX18P3-201ENST00000404856 2007 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VARS2Q5ST30 AC127502.2-201ENST00000602663 2351 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
VARS2Q5ST30 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
VARS2Q5ST30 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
VARS2Q5ST30 AP000766.1-201ENST00000561746 4140 ntBASIC7.91□□□□□ -1.14
VARS2Q5ST30 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
VARS2Q5ST30 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 UTY-202ENST00000331397 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
VARS2Q5ST30 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
VARS2Q5ST30 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
VARS2Q5ST30 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 HCG18-244ENST00000602516 2890 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 MTCO1P25-201ENST00000414449 1799 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 AL359893.1-201ENST00000447628 1580 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 PABPC1P7-201ENST00000413177 1513 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.9□□□□□ -1.14
VARS2Q5ST30 AL139276.1-201ENST00000311910 1001 ntBASIC7.9□□□□□ -1.14
VARS2Q5ST30 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms