Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXA13P31271 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HOXA13P31271 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.3□□□□□ -1.56
HOXA13P31271 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
HOXA13P31271 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA13P31271 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA13P31271 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA13P31271 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA13P31271 AP000473.2-201ENST00000602659 1537 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA13P31271 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HOXA13P31271 IGKV7-3-201ENST00000357453 298 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 RNU6-249P-201ENST00000363016 102 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 SNORA71.2-201ENST00000364941 134 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXA13P31271 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA13P31271 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA13P31271 MIR129-1-201ENST00000384972 72 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 AP000580.1-201ENST00000404439 358 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXA13P31271 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXA13P31271 YWHAZP2-201ENST00000440317 728 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 TCEA1P3-201ENST00000443005 880 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXA13P31271 MTND2P28-201ENST00000457540 1044 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 AC092691.2-201ENST00000461787 803 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXA13P31271 AC013356.1-201ENST00000489027 564 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 CEACAMP10-202ENST00000495431 496 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 AC025164.1-201ENST00000496249 478 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXA13P31271 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXA13P31271 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA13P31271 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXA13P31271 AC018442.3-201ENST00000523025 183 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXA13P31271 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.29□□□□□ -1.56
HOXA13P31271 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXA13P31271 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HOXA13P31271 AC122134.1-201ENST00000565664 1104 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXA13P31271 AC069061.3-201ENST00000582254 823 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.29□□□□□ -1.56
HOXA13P31271 AC090617.9-201ENST00000623751 147 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 AC011815.3-201ENST00000624194 473 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXA13P31271 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXA13P31271 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA13P31271 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HOXA13P31271 OR9K1P-202ENST00000641111 3217 ntBASIC5.29□□□□□ -1.56
HOXA13P31271 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXA13P31271 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HOXA13P31271 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXA13P31271 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.29□□□□□ -1.56
HOXA13P31271 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXA13P31271 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.29□□□□□ -1.56
HOXA13P31271 AL592148.3-201ENST00000608771 2646 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
HOXA13P31271 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA13P31271 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA13P31271 AC007342.7-201ENST00000624610 2337 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA13P31271 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 RPL5P19-201ENST00000404228 893 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 RPS27AP7-201ENST00000422792 455 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA13P31271 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.28□□□□□ -1.56
HOXA13P31271 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA13P31271 RPL23AP23-201ENST00000452590 471 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA13P31271 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 SCARNA10-201ENST00000459255 330 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 SYT14P1-201ENST00000481459 721 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA13P31271 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA13P31271 HPRT1P1-201ENST00000509498 657 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 SNORA70.11-201ENST00000515987 138 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 SNORA70.13-201ENST00000516116 138 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA13P31271 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HOXA13P31271 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA13P31271 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA13P31271 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA13P31271 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXA13P31271 AC084783.1-201ENST00000565846 910 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 AP005119.2-201ENST00000579735 1105 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXA13P31271 AC005776.1-201ENST00000603164 290 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA13P31271 AC012557.1-201ENST00000607115 611 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 AC245389.2-201ENST00000616023 576 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 AC015914.2-201ENST00000618167 288 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 AC242843.1-201ENST00000618702 573 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 MIR6758-201ENST00000620653 63 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 CASC19-206ENST00000641028 1430 ntBASIC5.28□□□□□ -1.56
HOXA13P31271 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA13P31271 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXA13P31271 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HOXA13P31271 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXA13P31271 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms