Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TM4SF1P30408 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.67□□□□□ -1.5
TM4SF1P30408 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.67□□□□□ -1.5
TM4SF1P30408 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF1P30408 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
TM4SF1P30408 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.67□□□□□ -1.5
TM4SF1P30408 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF1P30408 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.67□□□□□ -1.5
TM4SF1P30408 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF1P30408 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF1P30408 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF1P30408 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TM4SF1P30408 RNA5SP283-201ENST00000365604 119 ntBASIC5.67□□□□□ -1.5
TM4SF1P30408 RPS27AP11-201ENST00000402798 447 ntBASIC5.67□□□□□ -1.5
TM4SF1P30408 U3.35-201ENST00000408405 208 ntBASIC5.67□□□□□ -1.5
TM4SF1P30408 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.67□□□□□ -1.5
TM4SF1P30408 AC079809.1-201ENST00000415468 276 ntBASIC5.67□□□□□ -1.5
TM4SF1P30408 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.67□□□□□ -1.5
TM4SF1P30408 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.67□□□□□ -1.5
TM4SF1P30408 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TM4SF1P30408 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.67□□□□□ -1.5
TM4SF1P30408 AC093716.1-201ENST00000435923 377 ntBASIC5.67□□□□□ -1.5
TM4SF1P30408 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.67□□□□□ -1.5
TM4SF1P30408 AC006326.1-201ENST00000445465 787 ntBASIC5.67□□□□□ -1.5
TM4SF1P30408 AC093663.2-201ENST00000484625 313 ntBASIC5.67□□□□□ -1.5
TM4SF1P30408 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.67□□□□□ -1.5
TM4SF1P30408 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.67□□□□□ -1.5
TM4SF1P30408 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
TM4SF1P30408 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.67□□□□□ -1.5
TM4SF1P30408 RN7SL600P-201ENST00000581811 299 ntBASIC5.67□□□□□ -1.5
TM4SF1P30408 AC113403.1-201ENST00000604910 193 ntBASIC5.67□□□□□ -1.5
TM4SF1P30408 CR589904.2-201ENST00000612533 440 ntBASIC5.67□□□□□ -1.5
TM4SF1P30408 RNA5SP439-201ENST00000617595 124 ntBASIC5.67□□□□□ -1.5
TM4SF1P30408 AP000648.2-201ENST00000624182 404 ntBASIC5.67□□□□□ -1.5
TM4SF1P30408 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.67□□□□□ -1.5
TM4SF1P30408 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.67□□□□□ -1.5
TM4SF1P30408 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TM4SF1P30408 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.67□□□□□ -1.5
TM4SF1P30408 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF1P30408 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF1P30408 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF1P30408 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF1P30408 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
TM4SF1P30408 CPHL1P-201ENST00000461341 3407 ntBASIC5.67□□□□□ -1.5
TM4SF1P30408 AC110792.3-201ENST00000595906 1614 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 AL391684.1-202ENST00000641293 1636 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF1P30408 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF1P30408 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF1P30408 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TM4SF1P30408 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.66□□□□□ -1.5
TM4SF1P30408 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF1P30408 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.66□□□□□ -1.5
TM4SF1P30408 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.66□□□□□ -1.5
TM4SF1P30408 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.66□□□□□ -1.5
TM4SF1P30408 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TM4SF1P30408 AC008549.2-201ENST00000333482 706 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 MIR383-201ENST00000362257 73 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 MIR331-201ENST00000362302 94 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 SNORD51.1-201ENST00000365405 77 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.66□□□□□ -1.5
TM4SF1P30408 RNU11-201ENST00000387069 134 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 AL161909.1-201ENST00000397390 712 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 SNORA11F-201ENST00000408237 128 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 RANP4-201ENST00000413361 655 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 AC006946.1-201ENST00000429106 328 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.66□□□□□ -1.5
TM4SF1P30408 RN7SL542P-201ENST00000467147 294 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TM4SF1P30408 AL049874.2-201ENST00000492636 288 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.66□□□□□ -1.5
TM4SF1P30408 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.66□□□□□ -1.5
TM4SF1P30408 AC090515.3-201ENST00000560431 315 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 AC122134.1-201ENST00000565664 1104 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.66□□□□□ -1.5
TM4SF1P30408 AL360012.1-201ENST00000602813 131 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 RPL21P136-201ENST00000605378 396 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 AC015849.2-201ENST00000605738 409 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 AC020634.1-201ENST00000608701 549 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 uc_338.13-201ENST00000618243 179 ntBASIC5.66□□□□□ -1.5
TM4SF1P30408 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.66□□□□□ -1.5
TM4SF1P30408 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.66□□□□□ -1.5
TM4SF1P30408 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF1P30408 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF1P30408 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF1P30408 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF1P30408 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF1P30408 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF1P30408 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF1P30408 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
TM4SF1P30408 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF1P30408 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF1P30408 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TM4SF1P30408 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.65□□□□□ -1.5
TM4SF1P30408 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
TM4SF1P30408 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TM4SF1P30408 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
TM4SF1P30408 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.65□□□□□ -1.5
TM4SF1P30408 RNU6-40P-201ENST00000384254 107 ntBASIC5.65□□□□□ -1.5
TM4SF1P30408 AL356095.1-201ENST00000417217 199 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms