Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC090013.1-201ENST00000485147 480 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 AC104164.2-201ENST00000496953 495 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.2□□□□□ -1.58
COL1A1P02452 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.2□□□□□ -1.58
COL1A1P02452 RNU1-45P-201ENST00000517191 141 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.2□□□□□ -1.58
COL1A1P02452 AL021997.2-201ENST00000615674 271 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
COL1A1P02452 AP001002.1-201ENST00000625148 1513 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL1A1P02452 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL1A1P02452 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL1A1P02452 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL1A1P02452 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
COL1A1P02452 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL1A1P02452 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.2□□□□□ -1.58
COL1A1P02452 AL133243.3-201ENST00000617415 3004 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 RNA5SP513-201ENST00000364648 118 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 RPL21P65-201ENST00000406094 466 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 RN7SKP202-201ENST00000410439 330 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.2□□□□□ -1.58
COL1A1P02452 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.2□□□□□ -1.58
COL1A1P02452 RN7SL132P-201ENST00000478131 296 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 IGKV2-23-201ENST00000518729 323 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 AC105233.3-201ENST00000531125 744 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.2□□□□□ -1.58
COL1A1P02452 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.2□□□□□ -1.58
COL1A1P02452 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.2□□□□□ -1.58
COL1A1P02452 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.2□□□□□ -1.58
COL1A1P02452 AC112484.5-201ENST00000624189 228 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 AC112200.1-201ENST00000625015 234 ntBASIC5.2□□□□□ -1.58
COL1A1P02452 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL1A1P02452 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
COL1A1P02452 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL1A1P02452 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL1A1P02452 AC068870.3-201ENST00000625077 2536 ntBASIC5.19□□□□□ -1.58
COL1A1P02452 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL1A1P02452 AP005435.3-201ENST00000531260 3198 ntBASIC5.19□□□□□ -1.58
COL1A1P02452 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL1A1P02452 MIR1911-201ENST00000410783 80 ntBASIC5.19□□□□□ -1.58
COL1A1P02452 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.19□□□□□ -1.58
COL1A1P02452 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.19□□□□□ -1.58
COL1A1P02452 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.19□□□□□ -1.58
COL1A1P02452 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.19□□□□□ -1.58
COL1A1P02452 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.19□□□□□ -1.58
COL1A1P02452 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.19□□□□□ -1.58
COL1A1P02452 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
COL1A1P02452 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.19□□□□□ -1.58
COL1A1P02452 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
COL1A1P02452 AP001642.1-201ENST00000624727 2117 ntBASIC5.19□□□□□ -1.58
COL1A1P02452 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL1A1P02452 AC010300.1-201ENST00000600671 5134 ntBASIC5.18□□□□□ -1.58
COL1A1P02452 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL1A1P02452 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL1A1P02452 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL1A1P02452 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL1A1P02452 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL1A1P02452 AC010266.2-201ENST00000564741 3255 ntBASIC5.18□□□□□ -1.58
COL1A1P02452 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.18□□□□□ -1.58
COL1A1P02452 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.18□□□□□ -1.58
COL1A1P02452 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
COL1A1P02452 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
COL1A1P02452 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.18□□□□□ -1.58
COL1A1P02452 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL1A1P02452 AC112198.2-201ENST00000426589 6996 ntBASIC5.18□□□□□ -1.58
COL1A1P02452 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
COL1A1P02452 RNA5SP130-201ENST00000364431 114 ntBASIC5.18□□□□□ -1.58
COL1A1P02452 RPL6P29-201ENST00000414863 865 ntBASIC5.18□□□□□ -1.58
COL1A1P02452 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.18□□□□□ -1.58
COL1A1P02452 VN1R34P-201ENST00000447387 883 ntBASIC5.18□□□□□ -1.58
COL1A1P02452 RPL7P22-201ENST00000466005 733 ntBASIC5.18□□□□□ -1.58
COL1A1P02452 DEFB109F-201ENST00000491870 277 ntBASIC5.18□□□□□ -1.58
COL1A1P02452 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.18□□□□□ -1.58
COL1A1P02452 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.18□□□□□ -1.58
COL1A1P02452 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.18□□□□□ -1.58
COL1A1P02452 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
COL1A1P02452 AC053481.3-201ENST00000577881 843 ntBASIC5.18□□□□□ -1.58
COL1A1P02452 BNIP3P11-201ENST00000603878 563 ntBASIC5.18□□□□□ -1.58
COL1A1P02452 AL356863.1-201ENST00000623378 1080 ntBASIC5.18□□□□□ -1.58
COL1A1P02452 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL1A1P02452 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL1A1P02452 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
COL1A1P02452 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.17□□□□□ -1.58
COL1A1P02452 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.17□□□□□ -1.58
COL1A1P02452 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL1A1P02452 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
COL1A1P02452 MAPK10-372ENST00000641954 3413 ntBASIC5.17□□□□□ -1.58
COL1A1P02452 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
COL1A1P02452 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
COL1A1P02452 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
COL1A1P02452 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.17□□□□□ -1.58
COL1A1P02452 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL1A1P02452 SNORA62.3-201ENST00000365110 153 ntBASIC5.17□□□□□ -1.58
COL1A1P02452 RNU1-44P-201ENST00000384453 163 ntBASIC5.17□□□□□ -1.58
COL1A1P02452 AL121878.1-201ENST00000418638 859 ntBASIC5.17□□□□□ -1.58
COL1A1P02452 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.17□□□□□ -1.58
COL1A1P02452 AL512326.1-201ENST00000443050 721 ntBASIC5.17□□□□□ -1.58
COL1A1P02452 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.17□□□□□ -1.58
COL1A1P02452 RNA5SP246-201ENST00000458909 119 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms